Ipomoea nil (Japanese morning glory): 109158218
Help
Entry
109158218 CDS
T04663
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109158218
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109158218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109158218
NCBI-ProteinID:
XP_019161650
LinkDB
All DBs
Position
Un
AA seq
409 aa
AA seq
DB search
MANLHLALLILLLPLLFLIVSSTPDHHQDPDVIVQDVNRRINNASLARRGLGYLSCATGN
PIDDCWRCDANWEKNRQRLADCAIGFGKDALGGKNGRIYVVTDSGDDDPVNPKPGTLRHA
VIQDEPLWITFQRDMVIQLKQELVMNSYKTIDGRGASVHIAGGPCITIHYASNIIIHGVH
IHDCKPGGNGDIRDSPEHSGWWDGSDGDGISIFQGKHIWVDHCSLSNCHDGLVDAIHGST
AITISNNYFTHHDKVMLLGHSDAFTMDKNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWELYAIGGSASPTINSQGNRFLASNDRFRKEVTKHEDAAESEWKRWNWRSEGDLML
NGAYFRQSGAGASASTYAKASSLSARPSSLVASLTTAAGALSCKKGSHC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcttcacttagctcttcttattcttctactcccattattattcctcatcgtt
tcttccacgccggatcatcatcaagaccctgatgttatcgtacaagacgtaaaccggaga
atcaataatgcgtctttggctaggaggggtttgggttacttgtcttgcgcaaccggaaac
cccatcgacgattgctggcggtgcgatgccaactgggagaaaaaccgccagcgcctcgcc
gactgcgctatcgggttcggcaaggacgctctgggcggcaagaatggccggatttacgtg
gtcacggactccggcgacgatgaccccgtgaacccaaagcccgggacgctaagacacgcg
gtgatccaagacgagccgttgtggataacgttccagcgcgatatggttatccagctgaag
caagagctggtgatgaactcgtacaagacaattgatgggcggggcgccagtgtccacatc
gccggcgggccgtgtattacgattcattacgctagtaatattattattcatggggttcat
atccatgattgtaagccgggggggaatggggacattagggactcgccggagcattctggg
tggtgggatgggtccgacggcgatgggatttctatcttccaagggaagcatatttgggtg
gaccattgctcgctctcgaattgccatgatgggcttgtggatgccattcatggatccacc
gccattaccatttccaataactacttcactcatcatgacaaagttatgctcttgggtcat
agtgatgcctttactatggacaagaacatgcaggtcaccgttgcctttaatcattttggc
gaggggctggtccaaagaatgcctaggtgccggcatgggtatttccacgttgtgaacaac
gactatactcactgggaattgtatgccattggcggcagtgcatcccctaccataaatagc
caaggcaacaggtttcttgcatcaaatgatagatttcgaaaagaggtgacaaagcacgag
gatgcagcagaaagcgaatggaaaaggtggaactggcgatcagaaggggacttgatgtta
aacggtgcgtatttccggcagtcgggtgcaggggcttccgcctcaacctacgccaaggct
tccagcttaagcgccaggccatcgtctctcgtggcttctctcaccactgccgctggtgca
cttagctgcaagaaaggatcccactgctaa
DBGET
integrated database retrieval system