Ipomoea nil (Japanese morning glory): 109158237
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Entry
109158237 CDS
T04663
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ini01009
]
109158237
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109158237
03041 Spliceosome [BR:
ini03041
]
109158237
Protein phosphatases and associated proteins [BR:
ini01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109158237
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109158237
Spliceosome [BR:
ini03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109158237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
RRM_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
109158237
NCBI-ProteinID:
XP_019161671
LinkDB
All DBs
Position
Un
AA seq
908 aa
AA seq
DB search
MELKVSSPKLVLSSSDCNSDPEEKEISEDDDDDRNHKHRRRETHSESVDTDPFESVLTRP
YRKRNKPIGNGHLYKDSESASFEKEQSVQRRGMNSFSRPQYDSNLRIRSNQSLSGEPGPG
RARGREPGIWGQRDSRFNPNDIASQMAQQVPVPPGLFAGRGLPNVSNTPSSPWSSFGMIP
RMPITGLDPLHPLGLQGALRTPMNPTIGMGIPRQRCKDFEERGFCLRGDMCPMEHGMNRI
VIEDVQSLSQFNLPVSLSNAPLLGTASGQGALPAVIPSCSLVNSKAHMKGGKPVSTDDGL
GLNEAHTGGSMAGGADVYDPDQPLWTSVGETVQLMDMDPSDHGKPELSDGYDIEHPTRSN
LAATVSQGVWGRIGSSKGKLEIKEKVGPTVDSSSHIENETKKDLDSLSSQGVYSHGKHIN
VENLDPAITGTSFKSQTDSGCDAWKSCQKANSTLFVNGIPLKDNKREAIFSHFKKFGEVI
DIYTPQKSERAFVQFSKREEAEAALKAPDAVMGNRFIKLRWANRDNIPHNGATRVMPASA
PPHLSAAHKGKDSIQSLPRTIPNMPKPMVANIPKAPAPPQKKMESIELLREELRKKQEML
DQKRNEFRRQLDEFEKQASVLKDEGPCNQVVKRHKVEMASGLKDEGPSDQVAKRPKVEKV
ADFAKAETSSSTEPDIAVSSQHTEVVPDSNRSANNALLSCSKSSSPVATSEPSSLKQSIR
PLAPVGAPFIFNRYKLDNRPTAFKINPPIPSGLANAAVLKDHFSAFGELSSVELEDTEVQ
DNLDTSKISAQVSFASRRSAERAFLNGKSWQGHTLQFTWLPFINSNKGGVKENASACKDL
GIKENTSASCQQSTDTNTPTPMEDTLSSSLKTAVVGISETENIEKGKSDPRTSITDEDSQ
SGSANIST
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaaagtttcatctccaaagctagttctttcatcttctgattgtaatagtgat
cctgaagagaaagaaatcagtgaagatgatgatgatgatcgtaatcataagcatcgcagg
agggagacacattctgagtctgttgacactgatccttttgaatcagttctgacgagaccc
tacaggaagcgcaacaagcccattggaaatggacacctttacaaggattctgaatctgct
tcttttgagaaagaacagagtgtacaaagaagaggcatgaattcattttcccgacctcaa
tacgattccaaccttagaataaggtcaaaccaatcactgtctggagaacctggtcctggc
agagctcgcggaagggaaccaggtatatggggccaacgtgattctaggttcaacccaaat
gatattgcatcccagatggctcaacaagttcctgtcccacctggtctctttgctggaagg
ggcttgccaaatgtttctaatacaccaagttcaccttggagttcatttggaatgattccc
agaatgcctattactggtcttgatccactccatccccttggcttgcaaggagcacttagg
acacccatgaatcctacaattggtatgggcatacctcggcaaagatgtaaagattttgaa
gagcgtggattttgtctaagaggagacatgtgcccaatggagcatggaatgaatcgtatt
gttattgaggatgttcagagcctttctcagtttaatctccccgtttcgcttagtaatgca
cccctgctgggaacagctagtggacaaggagctttacctgcagtgatcccttcttgttca
ttggttaatagtaaagctcatatgaaaggtggaaaacctgtatcaactgatgatggatta
ggattgaatgaagcacatactggaggttctatggctgggggagctgatgtatatgaccct
gatcagcctttatggacaagtgttggtgaaactgtgcagctgatggacatggacccttct
gatcatggaaagcctgagctatctgatggttacgatattgaacacccaacaagaagtaat
ctggctgccacagtatctcaaggtgtttggggaagaattggtagttcaaaagggaaattg
gaaatcaaagagaaagttggacccaccgtggattcttcaagtcatattgaaaatgaaact
aaaaaagatctagattcattaagcagtcagggtgtctacagtcatgggaagcatattaat
gtagaaaaccttgatccagcaataacaggaacatcttttaaatcacaaactgattctgga
tgtgatgcttggaaatcttgtcaaaaggcaaattctactttgtttgtgaatggtattcca
ctaaaagacaacaaaagggaagctattttttcacattttaaaaaatttggagaggttatt
gacatttataccccccagaaaagtgaacgagcttttgtacagttttctaagagagaagaa
gctgaggcagctttaaaggcacctgatgctgttatgggcaaccgttttatcaagcttcgt
tgggctaatagggacaatattccacacaatggagctactcgagtgatgcctgcttctgct
ccaccccatctttctgctgctcataagggtaaagatagtatccaatctttgcctagaaca
atccccaatatgcctaagcccatggttgctaatattccaaaagccccagcacctcctcaa
aagaagatggagagtatagaactgttaagagaagaacttcgtaaaaaacaggagatgctt
gatcagaagcggaatgagttccgtcgtcaattggatgaatttgagaaacaagcttcagtt
cttaaagatgaagggccatgtaatcaggttgtgaagagacataaagtagaaatggcttca
ggtcttaaagatgaagggccatctgatcaggttgccaagagacctaaagtggaaaaggta
gctgatttcgcaaaagctgaaacatcaagctccactgaacctgatattgctgtatcatct
caacatactgaagtagtgcctgatagcaatagatctgcaaataatgcactactctcttgt
tcaaaatcatcttctcctgtggctacatcagaaccctcaagcctgaaacagtcaattcgt
ccattggcacctgtaggggctccttttatctttaatagatacaaactggacaatcgcccc
actgctttcaaaatcaatccacctataccaagtggtctggcaaatgctgctgtcctgaag
gatcacttttctgcttttggtgaactttcttctgtggagcttgaagacacagaggtgcag
gacaatttggacacatccaaaatatctgctcaggtatctttcgcatcacgccgttctgcc
gaaagagcatttttgaatggtaaaagctggcagggacatacattgcagtttacatggcta
ccattcattaattctaacaaaggtggagtgaaagaaaatgcttcggcttgcaaggatctt
ggaatcaaagaaaatacctctgcttcttgtcaacagtctacagacactaatactccaact
cctatggaagacactctctcctcttcactgaaaacagccgttgtggggatcagtgaaacc
gaaaacattgagaaaggtaaaagtgaccccaggacttcgatcacagatgaagactctcag
tctggctcagcaaacatttccacatag
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