Ipomoea nil (Japanese morning glory): 109158763
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Entry
109158763 CDS
T04663
Name
(RefSeq) cleavage stimulating factor 64-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109158763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109158763
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109158763
U7-dependent histone pre-mRNA processing factors
109158763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_occluded
RRM_10
partial_CstF
Motif
Other DBs
NCBI-GeneID:
109158763
NCBI-ProteinID:
XP_019162205
LinkDB
All DBs
Position
Un
AA seq
349 aa
AA seq
DB search
MANPDSQRRCVFVGNMPYNTTEEKLVKICEEIGPVVSLRLVTDRETGKPKGYGFCEYNDE
ETALSARRNLQGYEINGRQLKVDFAENHKISDKNREEGRGGHEPIGHAVATTAATAMAGA
LGAAQMDSSLHNHPIDPLSLYLSKMSRSELYEIISDMKAIATQNKEQARQILHTIPNLPK
AIFQAQLMLGLVTPQMLPQAGIVQSAAFQPSLAPSSSALSTPLDNIIKGCLETQIVANNS
ASLNKTIPTSGLPKRARAPNDSIDAMNHRPSKLSKLNDGRSCYSPPELNVVLRREEASSF
EKHALQITPDVESALLQQVMSLTPQQLNSLPQDQQQQVFQLQRMLRQSA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgattctcaacgtcgctgtgtttttgttgggaatatgccatataatact
actgaggagaagctagttaaaatttgtgaggagattggccctgttgtttccttgaggcta
gttactgacagagaaactggaaagcccaagggttatggattctgtgaatacaatgatgaa
gaaactgccctgagtgctcgccgtaatctccagggatatgagatcaatggtcgccaatta
aaagttgattttgctgagaatcataaaatttctgacaagaatcgtgaagaaggccgtggt
ggacatgagccaattggacatgcagtagctaccactgctgctactgccatggctggagct
cttggagctgctcaaatggattcaagtttacataatcacccaattgatcctttgtcactt
tatctttccaaaatgtcaaggagtgagctgtatgaaattatttctgatatgaaggctata
gcaacacaaaacaaggaacaagctcgccaaatattacatacaattcctaacttacctaaa
gcaatcttccaggcacaactaatgctgggattggttactcctcaaatgttacctcaagca
gggattgttcaatctgctgcattccagccttcattggcaccaagctcttcggcattgtct
actcctctggacaacattattaagggttgtcttgaaacccagattgttgctaacaattct
gcttcgctcaataaaacaattcccacttcaggtttgccaaagagagctagagccccaaat
gatagtatagatgcgatgaatcatcgcccatcaaagttgtcaaaactaaatgatggaagg
agttgctattcaccacctgaattaaatgtagttctgagaagagaagaggcttctagtttt
gagaagcatgctcttcagataaccccagatgtagagtcagccttattgcagcaagtgatg
agtctcacgccacaacagttaaactcattgccccaagatcagcaacaacaggtctttcag
cttcaacggatgcttcggcagtcagcataa
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