Ipomoea nil (Japanese morning glory): 109158925
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Entry
109158925 CDS
T04663
Name
(RefSeq) general negative regulator of transcription subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109158925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109158925
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109158925
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109158925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
109158925
NCBI-ProteinID:
XP_019162387
LinkDB
All DBs
Position
Un
AA seq
861 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKVIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELENQIDSFEAELEGLTVKKGKTRPPRLTHLETSIVRHKA
HIMKLELILRLLDNDELSTDEVNDVKDFLDDYVERNQEDFDEFADVDEFYSSLPLDKVES
LEDLVSIAPPGLVKGVSAAAVSLKTSIATSPVQVSATITSSVEQGGSAQEQVEETASRET
ASDTVARTPPPKATVASSSVPTTPSSSHMTSSAAIALSPKNVSNATKDEEIMGFPDRKSS
PALSESGLRGVGRGGLPSQPAVSILLGSSTNGAMDVIPSSTEVAKNNILGSDERLGSVGM
GQPLVSPLANRNILTQATKSSDGMGSTDSGNVGESNVMAGRVFSPSVVPGMQWRAGSSFQ
NQNELGQFRGRTEIAPDQREKFLQRYQQVQQGGQINILSMPMLSSGNQKQFSAQQNPLLT
QFNSQSSTVSPQHGLGVVAQAVGVNSVPSSASLQQHAGVIHQPSNQPNLTSTASRDSDMS
HSKVEELQQQQALPEDLVASAPSPGPGKNEDDLKANALETPGGVASPLAEQPQLPRDTDL
SPGQPLQLNQPSGSLGVIGRRSVADLGAIGDNLSSSPSNSGGMYDQLYSLQMLEAAFHKL
PQPKDSERAKSYTPKHPVVCPPSYPQVQAPILNNPAFWERLGADGYGTDTLFYSFYYQQN
TYQQYLAAKELKKQAWRYHRMYNTWFQRHEEPKLTTDDYEQGTYVYFDFHMSNDEHVGGW
CQRIKTDFKFEYNYLEDELRT
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagtcgaaagcttcagggcgagatcgaccgggtgttgaagaaggttcaagag
ggcgtcgacgtcttcgatagcatttggaacaaggtttacgacactgataatgcgaaccag
aaggaaaagtttgaagcagatttgaagaaggaaataaagaagctccagaggtatagagac
caaattaagacatggattcagtccagtgaaatcaaggataagaaggtcagtgcctcttac
gagcaggctctgatggatgctcgcaaggtcattgagcgtgaaatggaacgatttaaaata
tgtgagaaagaaacaaagaccaaagcattttcaaaagaaggtttgggccaacaaccaaag
acggatccgaaggaaaaggctaaatcagagacaagagattggttgaataatgtggttggg
gagctggaaaatcaaattgatagttttgaggctgaactggagggattgactgttaagaaa
gggaaaacaaggcccccgagattgacacatttggaaacatccattgttcggcacaaggcc
catatcatgaaactagagctgatcttgaggttacttgataatgatgagttgagcacagac
gaagtcaatgatgttaaagatttcctggatgattatgtggaacgcaatcaggaggacttt
gatgaatttgctgatgttgatgagttttatagctccctacctttagataaggtggagtct
cttgaagatctagtctccatcgctccccctgggcttgttaagggtgttagtgctgcagca
gtaagcttaaaaacttctatagccacatcacctgttcaagtatcggcaacaataacatct
tctgtagaacaaggtggttctgctcaggagcaagtagaggaaactgcttcccgggagact
gcctctgacacagttgcaaggaccccacctcctaaagctactgtggctagttcttctgtt
ccaacaacaccttcaagtagccacatgacttccagtgctgccattgctctgtctcctaaa
aacgtgtctaatgccacaaaagatgaggagattatgggcttcccagatcggaaatcttcc
ccagcactttctgaaagtggattaagaggtgttggtagaggtggccttcctagtcagcct
gcagttagtattttgcttggttccagtaccaatggtgctatggatgttattccgtcatct
actgaagtagcaaagaacaatattttaggatcagatgaaagacttgggagtgttgggatg
gggcagcctctagtttcccccctggctaacagaaacatcttgacacaagctactaagtct
agtgatggaatgggctctactgatagtggtaatgttggtgagtctaatgttatggctggc
agggttttctctccttcagttgtgcctggcatgcaatggagggctggaagttcctttcag
aatcaaaatgaactggggcagttccgtggaagaactgaaattgctcctgatcagagggag
aaatttttgcagagatatcagcaagtacaacaaggaggtcagattaacattcttagtatg
cccatgcttagtagtggaaatcaaaagcaattttctgcacaacagaatccactattaaca
cagttcaattctcaaagctccactgtgtcacctcaacatggcttgggagttgttgcccaa
gcagttggtgttaatagtgtcccttcatctgcatcattgcagcagcatgctggtgtgatc
catcaaccatctaatcaaccaaatttgacatctacagcatctagagattctgacatgagc
cactcaaaagtggaagaattgcagcaacagcaagcccttcctgaagatttggtggcttct
gctccatcacctggtcctggaaagaatgaggatgatttgaaggctaatgcattagaaaca
cctggtggagtggccagccctcttgcagagcaaccccaactgccgagggatacagatctc
tctcctggtcaaccgttacaattgaatcaaccatcaggaagccttggagtcattggtcga
agaagtgttgcagatcttggagcaattggtgataacttaagttcatcaccttccaattct
ggaggaatgtatgaccagttgtacagcttgcaaatgcttgaggctgcttttcacaaactt
cctcaaccgaaggattctgagcgtgctaagagctatacaccgaaacatccagtggtgtgc
cctccaagctatccccaagttcaggcgcccattcttaacaatcccgccttttgggaacga
cttggagccgatggctatggcactgacaccttattctattcattttactatcaacagaat
acttatcaacaataccttgctgctaaggagctgaagaaacaagcttggagatatcacaga
atgtacaacacttggtttcagcggcatgaggagccaaaattaactaccgatgattatgag
caggggacatatgtttactttgatttccatatgtccaacgatgaacatgttgggggatgg
tgccagcggataaagacggacttcaaattcgagtacaattaccttgaagatgaactcagg
acttag
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integrated database retrieval system
