Ipomoea nil (Japanese morning glory): 109159011
Help
Entry
109159011 CDS
T04663
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109159011
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109159011
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109159011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-UDP
Prok-RING_4
zf-RING_4
DUF3565
DUF5348
Motif
Other DBs
NCBI-GeneID:
109159011
NCBI-ProteinID:
XP_019162530
LinkDB
All DBs
Position
Un
AA seq
155 aa
AA seq
DB search
MGLLPYSPSSSDAGIPCRVLMSFAAVVSIIKEVLVCIVGYAGISISKWEYDGSVEALSSP
ETPISPSEFYVSAFKKASHPVRRYDSGRETGEECLVCLEELFEEDGDGWVYKLVCGHAFH
VVCMETWVRHCNLSCPLCRANVVPLLEEEESIYPM
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgctaccttattcaccgtcgtcatctgatgccggaatcccatgcagagttcta
atgagcttcgccgccgtggtttccattataaaggaagtccttgtttgcattgttggatat
gccggaataagcatctccaagtgggaatatgatgggtccgtcgaggcgctgagctcgccg
gaaacccccataagtccctcggaattttacgttagcgcgttcaagaaggcgagccatccg
gttcggcggtacgattccggcagggaaaccggggaggaatgtttggtttgccttgaggaa
ctgtttgaggaagatggagatggttgggtgtacaagttggtgtgtggacatgccttccat
gtggtgtgcatggagacatgggtgaggcattgcaatttaagttgccctctttgtagggct
aacgttgtacctcttcttgaagaggaggaatctatctacccaatgtaa
DBGET
integrated database retrieval system
