Ipomoea nil (Japanese morning glory): 109159058
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Entry
109159058 CDS
T04663
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109159058
03036 Chromosome and associated proteins [BR:
ini03036
]
109159058
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109159058
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109159058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
Tex_central_region
HHH_9
OB_PDCD11
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
109159058
NCBI-ProteinID:
XP_019162602
LinkDB
All DBs
Position
Un
AA seq
1646 aa
AA seq
DB search
MAGNNVISDDEDEVGVEEEERDEEPADGEGVDERDDDEEEEDEDEEGQDEYEKDGFIVDD
VDEEEEEEEEDRAHSDEERHKKKKRKKRESERNYELDEDDYELLQESNISVHRPKLESKK
FKRLKKAQRDEEGHSDFPEEEDFDESGKRGRTAEEKLKHSLFGDDEVQPLEDIAEEEQPE
EEEEDADIGEEDEMADFIVDEEEVDEHGAPVRRKKLNKKKSRQAPGVSSTALQEAHDIFG
DVDELLRLRKQGLAKMGHYDEGGEWRERKLEDEFEPIILSEKYMTEKDERIREIDIPERM
QLSEESTGPPMDEMSISEETNWIYNQLRFVPPFNKRETGTSEEGNELPIDKDDIMRFLDL
MHVQKLDVPFIAMYRKEECMSLLKDPDQGEVDALENNSDKKPALNWHKVLWAIQDLDRKW
LLLQKRKSALQSYYNKRFEEESRRVYDETRLNLNKQLFESISKSLKAAGSEREVDDVDSK
FNLHFPPGEVGADEGQFKRPKRKSQYSICSKAGLWEVASKFGYSSEQFGLQISLEKMRMD
ELEDPKETPEEMASNFTCAMFETSQAVLKGARHMAAVEISCEPSVRKYVRSVYMTDAVVS
TSPTPDGNAAIDPFHQFAGVKWLRDKPLSRFDDAQWLLIQKAEEEKLLQVTIKLPAPVLE
KLLSDSNDYYLSDGVSKSAQLWNEQRKLILQDAISNFLLPSMEKEARSMLSSRAKSWLLS
EYGQLLWNKVSVGPYQRRENDVSSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVVDILY
AGSLSLRGHNVNDEQRKKNDQQRLLKFMMDHQPHVVVLGAVNLSCTRLKEDIYEIIFKMV
EDNPRDVGHEMDNLNVVYGDESLPHLYENSRISADQLPSQSGIVRRAVALGRYLQNPLAM
VGTLCGPGREILSWKLSSMENFLTPDEKYGMIEQIMVDATNQVGLDLNLAISHEWLFAPL
QFISGLGPRKAASLQRSLVRQQTIFTRKDLLTEHHLGKKVFVNAVGFLRVRRSGYASNSS
TYIDLLDDTRIHPESYSLAQELAKDVYLKDVGEDTNDDDEVLEMAIEHVREKPQLLRGVD
PYKYADAKQRISKKETLNDVRLELMQGFQDWRRPYVEPSQDEEFYMISGETEDTLSEGRI
VQATVRRVQPQKAICALESGLSGILMKEDSSDDWRDINDLTEKLRDGDILTCRIKSIQKN
RYQVFLSCKENDMRGNRFQNNRIMDAFYHEDRSSLPTEQEKARKEKELAKKHFKPRMIVH
PRFKNITADEAMEFLSDKEPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKD
ITSLLRIGKTLKIGDDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRKGSKAEVDELLRIE
KSDNPMRIVYSFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDLDRVVAY
FQRHIDDPQDSAPSIRSVAAMVPMRSPAAGGSSGFGGDWRGGQNMDRDRTQGSRQGRNDY
RNGGNQDGHPSGVPRPFGGRGRGRGRGRGRGSYDHNRGNNDGNDRQDSDYGSQKWGSKGD
DGWGGGGGGSGGGGWGSTSDGGGGGGGWGSTSDGGGGGGWGGDKGGGGGSDDSGWGGGKK
TPTQSQPGGGGGGWSENSGGGGGGGW
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaacaacgtgatctccgacgacgaagatgaggttggagttgaggaagaggag
cgcgacgaagagcccgcagacggggagggagttgacgagcgagacgatgatgaggaggaa
gaggacgaagatgaagaagggcaagatgagtatgagaaggatggatttatagtagatgat
gttgatgaagaggaagaggaggaggaggaagatagagctcacagcgatgaagagagacac
aagaagaagaaaaggaagaaaagggagtctgagaggaattacgagcttgatgaagacgat
tatgaacttctgcaagaaagcaacatatcagttcatcgcccaaaacttgagagcaaaaaa
ttcaagcggctgaaaaaagctcaacgggatgaggaagggcattctgattttcctgaggag
gaggattttgatgaatctggcaagcgaggccgtacagctgaggagaagctcaagcacagt
ttatttggtgatgatgaagtgcaaccacttgaggatattgctgaggaggagcagccagag
gaagaagaggaggatgcagatattggtgaagaagatgaaatggctgacttcattgttgat
gaagaagaagttgacgagcatggtgcacccgtgagaaggaagaaattgaataaaaagaag
tccagacaggccccaggagtttcatccaccgcacttcaggaagcccatgacatatttggt
gatgttgatgagctcttaaggcttcgcaaacaaggattggcaaagatgggccattatgat
gaaggtggtgagtggagggaaaggaagcttgaagatgaatttgagccaattattctttct
gaaaaatatatgactgagaaggatgagaggattcgggagatagatatcccagaaagaatg
cagttatctgaggaaagcactggtccacctatggatgagatgagtataagtgaggagact
aactggatctacaatcaactccggtttgtgcccccatttaacaagcgggagacagggaca
agtgaagaaggaaatgaacttccaattgacaaagatgatattatgaggtttttggattta
atgcatgtgcagaagttggatgtaccatttattgctatgtaccggaaggaggaatgcatg
tccttacttaaggatccagaccagggcgaagttgatgctcttgagaataactctgacaaa
aaaccagcgctaaattggcacaaggtgctttgggcaatccaggatttagatagaaagtgg
cttcttcttcagaagcggaagagtgctctccaatcatattataacaaacgctttgaagag
gagtcgcgtagggtatatgatgaaacaaggctaaatttgaataaacagctttttgaatca
atttctaagtcactcaaagcagctgggtcggaaagggaggttgatgatgtcgattcaaaa
tttaacctacacttcccccctggtgaagttggtgctgatgaaggtcaatttaagaggcca
aagaggaaatcacagtatagcatttgcagcaaggctgggttgtgggaagttgcgagcaag
tttggttacagctccgaacaatttgggttgcagatatctctggaaaagatgagaatggat
gaattggaagacccaaaggaaacaccagaggagatggcttcgaacttcacctgcgcgatg
tttgaaacatcacaagcagttctcaagggtgctaggcacatggcagcagttgagattagc
tgtgaacctagtgtccggaaatatgtccgttctgtctatatgacagatgctgtagtatca
acatcacctactccggatgggaatgcagctattgatccttttcatcagtttgctggagtg
aagtggctacgggacaagccactttccagatttgatgatgcacaatggcttctcatacag
aaggctgaagaggagaaactgttacaagttactataaagctgccagcaccggtcctggag
aagcttttgtccgactccaatgattattaccttagtgatggtgtgagtaaatctgctcaa
ttatggaatgagcagaggaagttgatacttcaagatgcaatttctaattttctcttacca
tcaatggagaaagaagcaagatctatgttgtctagtagagcaaagagttggttactttcg
gaatatggacagcttttgtggaacaaagtttctgttggtccatatcagcgaagagaaaat
gatgttagctcagatgaagaggctgcaccaagggttatggcatgctgttggggacctgga
aaacctgcaaccacttttgtgatgttggattcatctggagaagttgtggatatcttgtat
gcagggtctctcagccttcgtggtcataatgttaatgacgagcagagaaagaagaatgat
cagcaaaggcttttaaagtttatgatggatcaccaacctcatgttgttgtactaggagct
gtgaatttgtcttgcacacgtctcaaggaggatatttatgagattatatttaagatggtc
gaggataacccaagagatgttggtcatgagatggataatttgaacgttgtgtatggtgat
gagtcccttcctcatctttacgagaattcccgtatttcagctgaccagcttccttcacag
tcgggtattgtgagacgtgctgtagcccttgggcgttaccttcaaaatcctttagcaatg
gttggtacattatgtggaccagggagggagatactatcctggaagctgagttctatggag
aactttttaactcctgatgagaagtatggaatgattgaacagattatggtggatgccact
aaccaagtgggtctagatcttaatttggctataagtcatgagtggttatttgcacctctg
caatttatttctggactaggacccagaaaggctgcatcgctgcaaagatccttggttaga
caacaaacaatattcaccagaaaggacctgttgactgaacatcaccttggtaaaaaggtg
tttgtcaatgcagtcggtttcctgcgagtgcggcgaagtggatatgcttctaacagtagt
acatatattgacttgttggatgatacaaggatacatccagaatcgtatagtcttgctcag
gaattggccaaagatgtttatctcaaagacgttggtgaagatacaaatgatgatgatgaa
gtgctggaaatggctattgagcatgtgagagagaaacctcagttactaaggggggtcgat
ccttataaatatgctgatgcaaagcagcgaataagtaaaaaggaaactctgaatgatgta
agattggagctgatgcaaggatttcaggattggagaagaccatatgtagagcctagccag
gatgaggagttttacatgatttctggtgagactgaggatacactatctgaaggaagaatt
gtgcaagcaaccgttcgcagggttcaacctcagaaagctatatgtgctcttgaatctggt
ctgtctggcatactcatgaaggaagattcttcagatgattggagggatataaatgactta
actgaaaaattacgcgacggtgatatattgacttgtagaatcaagtcaatacaaaagaac
agataccaggtgtttttaagttgcaaagagaatgacatgagaggtaaccgcttccaaaat
aataggattatggatgctttctaccatgaagatcgcagtagcttacctactgagcaagaa
aaagctcgcaaagagaaggagcttgcaaagaagcatttcaagccaaggatgattgttcat
cctcgtttcaaaaatataacagcagatgaagcaatggagttcctgagtgacaaagaacct
ggtgaaagcatcatacgccctagttcccgtgggccatcttatttaactttaacactcaag
gtttatgatggcgtgtatgcccacaaagatatagtggaaggtggaaaggagcacaaagat
attacaagtctgctccgtatagggaagactttgaaaataggggatgacacatttgaggat
ttggatgaggtgatggatcgttatgttgatccattagttgctcatctgaaggcaatgctg
aactaccgtaagtttaggaaggggagtaaagcagaagtcgatgaactccttcgcattgaa
aaatctgataacccaatgaggattgtctattcttttggtatatctcatgaacatccgggt
acttttatcttgacttatatcagaagttcaaatccgcaccatgaatatgttggtctgtat
ccaaaagggttcaagttcagaaagagaatgtttgaggatcttgatcgtgttgtggcatat
ttccaaagacatattgatgatccacaggactctgcaccatcaatacgatcagttgctgca
atggtgcctatgcggagccctgctgctggtggctcatcaggatttggtggtgattggaga
ggtggtcaaaatatggaccgtgacagaacacaaggttctagacaagggagaaatgattat
agaaacggtggtaatcaagatggacatcctagtggagtgcccaggccatttggtggtcgt
ggacgcggacgtggacgaggccgaggacggggatcttatgatcataacagaggaaacaat
gatggtaatgacagacaagattcagattatggctcccaaaagtggggttccaaaggtgat
gatgggtggggtggtggtggtggaggaagcggtggtggcggttggggaagtacaagtgat
ggtggaggcggcggtggcggttggggaagtacgagtgatggtggaggcggtggtggatgg
ggcggcgacaaaggtggtggtggtggttcagatgattctgggtggggtggcggcaaaaag
actcccacgcagtcgcaacctggtggtggtggtggtggatggtctgagaacagtggtggt
ggaggtggaggtgggtggtga
DBGET
integrated database retrieval system
