Ipomoea nil (Japanese morning glory): 109159137
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Entry
109159137 CDS
T04663
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03030
DNA replication
ini03410
Base excision repair
ini03420
Nucleotide excision repair
ini03430
Mismatch repair
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109159137
03410 Base excision repair
109159137
03420 Nucleotide excision repair
109159137
03430 Mismatch repair
109159137
03440 Homologous recombination
109159137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109159137
03400 DNA repair and recombination proteins [BR:
ini03400
]
109159137
Enzymes [BR:
ini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109159137
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109159137
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109159137
MMR (mismatch excision repair)
DNA polymerase delta complex
109159137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
109159137
NCBI-ProteinID:
XP_019162710
LinkDB
All DBs
Position
Un
AA seq
1087 aa
AA seq
DB search
MSSGNPRKRQQSAPAPSPQLQKKQQAAVEEEDVDEDIFLEETLLQYDEDSQVLRELEEQS
ALAERLRKWKRPQLSQAYLSQSQSVVFQQLEIDYVIGESHKELLPNSSGPAAIIRIFGVT
KEGHSVCCHVHGFEPYFYISCPAGMGPDDISRFHQILEDRMREANRNNRVPKFVRRIEMV
QKRSIMYYQQQGSQPFLKIVVALPTMVTTCRGILDRGIQIDGLGMKSFMTYESNVLFALR
FMIDCGVVGGNWIEVPAGKYKKSSKNISYSQLEFDCLYSDLISHKPEGEFSKMAPFRILS
FDIECAGRKGHFPEPTHDPVIQVANLVTLQGQDQPFVRNVMTLKSCSPIVGVDVMSFETE
REVLLAWRDFVREVDPDILIGYNICNFDLPYLIRRAEALGMVEFPILGRVRNSRVRVKET
TFSSRQLGTRESKEITLEGRVQFDLLQVVQRDYKLSSYSLNSVSAHFLNEQKEDVHHSII
SDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIK
VLSQLLRKAKEKNLVIPNVKQAGSEQGTYEGATVLEPRAGFYEKPIATLDFASLYPSIMM
AYNLCYCTLVTPDDVRKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKA
DLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTK
KLVEDKFKVLGGYQHNAEVIYGDTDSVMVQFGVSTVEEAMNLGREAADFISGTFIKPIRL
EFEKVYYPYLLISKKRYAGLLWTNPDKFDKMDAKGIETVRRDNCLLVKNLVTECLHKILI
DRDVPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAA
TAPNMGDRVPYVIVKGAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPLLRIFEPI
LKNASKELLHGSHTRSISISTPSTGGIMKFAKKQLTCIGCKALISESDRTLCKHCKGREA
ELYCRSVANVAELEKLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKV
QLDRWSF
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggcaatcctcggaagcgacaacagtcggcgccggcaccgtcgccgcagctg
cagaagaaacaacaggctgccgtggaagaggaggacgtcgatgaagacatcttcctcgaa
gaaacattgcttcagtacgatgaggactcccaggtccttcgcgagctcgaggagcaatcc
gccctcgccgagcgtctccgcaaatggaagcggcctcagctttcgcaagcttacctctca
cagtcgcaaagcgtagtatttcagcaattggaaattgactacgtgattggggagagccat
aaagaattgctgcctaattcttctggtcctgctgccattataagaatatttggagttact
aaggaaggtcacagtgtttgttgtcatgtacatggatttgaaccatatttctatatcagt
tgccctgcaggaatgggtcctgatgacatatctcgttttcatcaaattcttgaggataga
atgagagaggcaaataggaacaatagggttcctaagtttgtccgtcgcattgaaatggtc
cagaagagaagtattatgtattaccagcagcagggttctcaaccttttcttaaaattgta
gtggcattgccaacaatggttaccacatgccgtggtatacttgataggggtattcaaatt
gatggacttggtatgaagagtttcatgacatatgaaagtaatgttctcttcgctcttcgc
tttatgattgattgcggcgttgttggtggaaattggattgaagttccagctggaaaatac
aagaaatcatcaaagaatatctcttattcccaactggagtttgattgcctctattctgac
ttgataagccataagcctgaaggagaattctcaaagatggctccttttcgtatattaagt
tttgacattgaatgtgctgggcgtaaaggccactttcctgaacctacccatgatcctgtt
atccaggtagcgaacctagttaccttgcagggacaggatcagccgtttgtgcgtaatgtt
atgacccttaagtcttgctcaccaatagttggggttgatgtcatgtcctttgaaactgaa
cgagaggttttactagcttggagggactttgtacgggaagttgaccctgatatattaatt
gggtataacatctgcaactttgatttgccatatctcattcggagagctgaggccttaggg
atggtagagtttcctattcttggacgagtacgaaacagcagggtccgtgtgaaagaaaca
acattttcttcaaggcaacttggaacaagggaaagtaaagaaattactttggaagggagg
gttcaatttgatttacttcaggttgtacagagggattataaattgagctcttattcactt
aattctgtctcagcacattttcttaatgaacagaaagaggatgtacatcattctatcata
tctgatcttcaaaatggtaactcagaaacaaggaggcgacttgccgtatattgtttaaag
gatgcttatctccctcagcggcttttggataaattaatgttcatttacaactatgtggaa
atggctagagtcacaggtgttcctatttcattcctcctgtctcgggggcagagcattaag
gtgctttctcaacttttgaggaaggcaaaagaaaaaaatctcgtcatcccaaatgtcaaa
caagctggatctgagcaaggaacatatgagggtgcaacggttttggagccccgtgctggg
ttctatgagaaacccattgctactctggattttgcatctctatatccatcaatcatgatg
gcatataatttgtgttactgcacactggtaactcctgatgatgtccgcaaactcaacctc
cccccggagtgtgtaaacaagactccatctggtgaaacatttgtcaagtcaaatttacag
aagggaatactcccggaaattcttgaagaactactggcagcccgtaaaagagccaaagcg
gatttaaaggaagcgaaggatcctcttgagaaagctgttttagatggacgtcaactggct
ttgaagattagtgcaaattctgtatatgggtttacgggagctaccgttggtcaattacca
tgtctggaaatatcttcaagtgttacaagctatgggcggcagatgattgaacacactaag
aaacttgttgaagacaagtttaaggtacttgggggctaccaacacaatgctgaggttata
tacggagatacggattcagtcatggtgcaatttggtgtatctacggtggaagaagccatg
aacttgggtagagaagctgctgatttcattagtggaacattcataaaaccaataagactt
gaatttgagaaggtttattatccatatctactgattagcaagaaaagatatgctggcctt
ttatggactaatccagacaaatttgacaaaatggatgctaaaggaattgaaacagtgcga
agggataattgtctgttggtcaagaaccttgtaactgagtgccttcacaaaatactgatc
gatagagatgttcctggagctgttcaatatgttaaaaatactatttctgatcttcttatg
aatcgcatggatttgtctcttcttgttattacaaagggcctgacaaaaacaggagatgat
tatgaagtaaaggcagcacatgttgaacttgcagagcggatgcgcaagcgagatgctgct
actgctccaaatatgggtgatagagtaccttatgtcattgttaagggtgctaaaggtgct
aaggcttatgaaaaatcagaggatcctatatatgtcttagaaaacaacattccaatagat
ccacagtactatcttgaaaatcagattagcaagccacttctaaggatatttgagcccata
ttgaagaatgccagtaaagagcttctgcatggaagccatactagatcgatctccatttca
actccttccaccggtggcataatgaaatttgccaaaaaacaattaacttgcattggatgc
aaagcactaatcagtgaatcagatcgaactctgtgcaagcactgcaagggaagagaagct
gaactttattgtagatcagttgcaaatgtggctgaactagagaagctgtttgggaggttg
tggacacagtgccaagagtgtcaaggctcgcttcatcaggacgtgctgtgcaccagtcga
gactgtcccatcttttatcgaaggaagaaagcgcagaaagacatggcggaagccaaggtc
caattagatcggtggagcttctag
DBGET
integrated database retrieval system
