Ipomoea nil (Japanese morning glory): 109159213
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Entry
109159213 CDS
T04663
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ini04812
]
109159213
Cytoskeleton proteins [BR:
ini04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109159213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_HPS5
WD_LRWD1
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
109159213
NCBI-ProteinID:
XP_019162837
LinkDB
All DBs
Position
Un
AA seq
918 aa
AA seq
DB search
MAKRGYKLQEFVAHSGNVNCLRFGKKTCRMFLTGGDDHSVNLWSIGKPTSTSTLSGHTSP
VESIAFDSAEILVAAGSSSGLIKLWDLEDTKMIRTLSGHRSYCTALEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKIWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVQFWDLETFEMIGSVRREATGVRSIAFHPDGRT
LFCGLDDSLKVYSWEPVICHDSIDMGWSTLGDLCIHDGKLLGGTYYQNSVGVWVADISLI
EPYGMNAERNCNLEQKREHKESTVEMLGNNRSSNSSLRCSSPDFDSKEIKNIYVDSEDPV
TTKKVGSFPPPEVIPSPDPKESDLLSTQKQNSVKVLHTKPTNNKSFIAPVLVPHDSPDGK
DFASSRRESISTTRASAPKPSHLRRPSNNFDMEKTIETELAENVSKENDSTIKNDEEKSE
KTSLLSAIPDQGNGDAALESTKGLSSVKVVNGVAVVRGRTRSLVERFERREILQVNDASS
PETVLCPKPEEVKTSPLPVERVDRTGRSKADDSPTTDTVPHSKPEETKLPPLPVERVDRT
GRLKADDSRTTETVPHSKPEETKPPPSPVEKFDRREKLKADAAQIRESVPRSKPEQTKTP
PSPIKRFDRRERLRADAARIHSTVTHSKPEEARRSPLPVERFDRRERLRAGDAHSSDTVP
SSKPEEAKETPLPITNTQIVGRAETAESDNNIIENLMQNHDTLLSTFRSRLTKLQVVRHF
WERNDIKGAINALKKLPDHSVQADVVSVLIERMEVITLELFSSLLPVLLALLDSKIERHA
NVSLEMLLKLVAIFGPVVRSAASARPSVGVDLHAEQRIECCRQCLAHLQIIQQIIPTLIQ
RGGLVAKSALQLNLVLQQ
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtggatataaattgcaggagtttgtggcgcattccgggaatgtgaactgt
ttaaggtttgggaagaagacatgtcggatgttcctcactgggggtgatgatcacagtgtg
aatctttggtccattggcaaaccaacctccacatctaccctatctggccacacaagtcca
gtagagtctatagcttttgattcagctgagattttagtggctgctggatcttcatccgga
ttaataaagctgtgggatctagaagatacaaaaatgattcgcacgcttagtggacacaga
tcctattgcactgctcttgaatttcatccatttggtgaattttttgcttctggttctatg
gacactaatctaaagatatgggatataagaaagaaaggatgcatacacacatacaaaggg
cacacgcgaggaattagcaccataagattcactcctgatggtcggtgggtagtctctggt
ggattcgacaatgttgttaagatatgggatctaacggctggaaagcttttacatgatttc
aagttccatgaaggacatattcgatccatagatttccatcctcttgagtttcttctagca
acaggttcagcggaccgaactgtacagttttgggatttggaaacttttgaaatgattgga
tctgtgagacgtgaggctacaggagtacggtcaattgcctttcatcctgatggaaggact
ttattttgtggactagatgatagtttgaaggtttattcatgggaacctgtaatttgtcat
gattccattgatatgggatggtcaacgcttggtgatctctgcattcatgatggaaaactt
ttgggtggtacatattaccaaaactcagttggagtttgggtggcagatatttcgctcatt
gaaccctatggtatgaatgctgagcggaattgcaacttggagcagaaacgtgaacacaag
gaaagtactgtggagatgttagggaacaatagaagttcaaattctagtcttcgctgctca
tctcctgattttgattccaaagagataaagaatatatatgttgacagtgaagatcctgtc
actacaaagaaggttggttcatttccacctcctgaagttattccatcgcctgatcctaag
gagagtgatcttctatccactcagaagcagaattctgttaaagtattgcacacaaaacct
accaacaataaatctttcattgccccagttcttgtgcctcatgatagtccagatggaaaa
gactttgccagttctagaagggaaagtatttccactaccagggccagtgcgcctaagcca
tctcatttaagacggccatcaaacaactttgatatggagaagacaattgaaacagagtta
gctgagaatgtctcgaaggaaaatgactcaacaattaaaaatgatgaagagaagtctgag
aaaacctcgttactgtcagcaattccagatcagggaaatggtgatgctgccttggagagc
actaaagggttgagttctgttaaagttgtcaatggagtggctgtggtgcgaggaaggaca
cgcagtctggttgagagatttgagagaagagagatattgcaagttaatgatgctagcagt
cctgaaacagttctttgtcctaaacctgaggaagtaaaaacatcccctttaccggttgag
agggttgatagaacgggaaggtcaaaagctgatgattcccctactactgatacagttcct
cattctaaacctgaggaaacaaaactacctcctttgcctgttgagagggttgacagaaca
ggaaggttaaaagctgatgattcccgtactactgaaacagttcctcattctaaacctgag
gaaacaaaaccacctccttcacctgttgagaaatttgataggagagaaaagttgaaggct
gatgctgcacaaattcgtgaatcagttcctcgttctaaacctgagcaaacaaaaacacct
ccttcgcctatcaagagatttgatagacgggagagattgagagctgatgctgcacgaatt
catagtacagtaactcattctaaacctgaggaagcaagacgatctcctttgccggttgag
agatttgatcgaagagagaggttgagagctggtgatgctcatagttctgatacagttccg
tcctctaaacctgaggaagcaaaagaaacccctttgccgattactaatacgcaaattgtg
ggaagggctgaaacagctgaaagtgataataatatcattgaaaatctgatgcaaaatcat
gacacccttttaagtacatttaggtcgcgcctgacaaagttgcaggtagttcgacatttt
tgggaacggaatgacattaagggtgctatcaatgccttgaaaaagttgcctgatcattct
gtacaagcagatgtagtcagtgttctgattgaaagaatggaggttattaccttagagttg
ttttcttctttacttcctgtgctattggccttactagacagcaagattgaaagacatgca
aatgtttctctagagatgctgttgaagctcgtggcaatctttggtccagtggtccgatca
gctgcttctgcacgtccatctgtaggtgttgatcttcatgccgagcagagaattgagtgc
tgcagacagtgcttggcgcatctccaaattatccaacagattattccgacactcatacag
aggggtggtttggtggcaaaatctgcacttcaactaaatcttgttcttcagcaatga
DBGET
integrated database retrieval system
