Ipomoea nil (Japanese morning glory): 109159592
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Entry
109159592 CDS
T04663
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ini04812
]
109159592
Cytoskeleton proteins [BR:
ini04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109159592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
eIF2A
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_IP5PC_F
PAN2_N
PROPPIN
VPS8_N
Nbas_N
Motif
Other DBs
NCBI-GeneID:
109159592
NCBI-ProteinID:
XP_019163246
LinkDB
All DBs
Position
Un
AA seq
804 aa
AA seq
DB search
MTTTKRAYKLQEFVAHSLSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLMH
EFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRSMTFSPDG
KTLLCGLHESMKVFSWEPIRCHDSVDVGWSKLSDLNVHEGKLLGCSYNQSCVGVWVVDIS
RIEPYTIRTNTRLNGHSEVKSNSSTTLSGLAEDSAKASLGRLSISQNSDPVKETKSFGRL
SVSQNPDIQREPKSQASTGNVPGTPQRINLNVGQRATSVNSVAVPNMTSLKRNSVKVQSS
TNSSAFNRSEVVPVIVPRNNNIKLEQLAESRKEGVGAHVPPQSLQLKTSDLRKFSNATGD
PGRPTYSTESDIDVPKPAELIGIPERNIFPAIKNSAIGIAAPERNMKDDRHFPSLKLEMN
TTAEPLARNQHENYDTQVPTSNKDAYSMESQRRGRARPLVANWDKRERVTQFDGFAVSCP
TGNLHAQSTLQANIYEQRGHTLSTEKETLSYSDEDFIANLMEQHDQFVDSMRARLAKLEV
VCRYWQRNDIKGALGVMEKMSDHAVLADVMYLLTKQSDIITLDIYTSLLPLLSALLESDM
DRHQDISLEMLLKLVKVFGSMIYSSRSAPASVGVDIEAEQRLERYNLCYVELEKVKCCLP
TLTRKGGSIAKSAQELLLVLKEFS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgactactaccaaacgtgcttacaagctacaggagtttgtagcacattctttgagtgtg
aactgcctcaaaatcgggagaaagtcatctagggttcttgtaactggtggagaagatcac
aaggttaatctttgggccattggcaagcctaatgctatcctgagtctgtcaggtcattcg
agcgggattgattcagttagctttgattcttctgaagttttggtagctgcaggagcagca
agtgggactatcaagctttgggatttagaggaggccaagattgtccggacactcaccgga
catcggtccaattgtatatctttggacttccatccctttggagagttcttcgcatctggt
tctcttgacacgaatctaaagatatgggatatcaggcgaaaagggtgtatccatacctac
aaaggtcacacacgaggtgttaatgccatcaggtttacaccagatggcaggtgggttgta
tctggtggagaagacaatactgtgaagctgtgggatttaactgctggaaagttgatgcat
gaatttaaatgtcatgaaggccagattcagtgcattgattttcatccacatgagtttttg
ctggcaacaggttcagctgacagaacagttaaattctgggatctagagacatttgaactt
ataggctcagctggacctgagacttctggagtgcgctctatgacatttagccctgatggg
aaaaccctactatgtggtttgcatgagagcatgaaggttttctcatgggaaccaattaga
tgtcatgattctgtagatgtaggatggtccaaactgtcagatctaaatgtccatgaaggg
aaacttcttggctgttcctacaatcaaagttgtgttggtgtatgggttgtggatatatcg
cgcattgaaccatatacaattagaactaatactcgattaaatggtcactctgaagtgaag
tctaattcaagcacaactttatcgggactggcagaggattctgcaaaagccagcttaggc
aggctttcaatttctcaaaattcagatcctgtcaaagaaactaaatcttttggaagactt
tcggtatcccaaaatccagacattcaaagggagcccaaatctcaagcatctactggaaat
gttcctggtaccccacaaaggataaatctgaatgtcggtcaaagagcaacttcagtaaat
tcagttgcagttcctaacatgacatctctaaagaggaattcagtcaaagttcaatcatca
accaactcttcagctttcaacagatcagaagtggtgcctgttattgtcccaagaaataac
aacataaaattggagcagttagctgaatcaaggaaagaaggagttggagcccatgtgcca
ccacaatccttgcaattgaaaacatctgatttacgtaagttttcaaatgcaactggtgac
ccaggaaggccgacttattctacagaatctgacattgatgtcccaaaacctgctgaattg
attggaattccagagaggaacatatttcctgcaattaagaattcagcaattggaattgct
gcacctgagaggaatatgaaggatgacagacattttccttctctaaaacttgaaatgaat
actactgctgaaccacttgccagaaaccagcatgaaaactatgatacccaagtgcctacg
tctaataaagatgcatattccatggaaagtcaaagaagagggagagcacggccactcgta
gcaaattgggacaagagagagagagttactcagtttgacggttttgcagtcagctgtcct
actgggaatctacatgctcagagcacactccaagctaatatatatgaacagagggggcac
actttatcaactgaaaaggagacactttcttatagcgatgaggacttcattgccaaccta
atggaacaacatgatcaatttgttgactcaatgcgggctcgtttagctaaattagaggta
gtctgcagatattggcaacgaaatgatattaaaggggcactgggtgtgatggagaagatg
tctgatcatgctgtgcttgctgatgtgatgtacctcttgaccaaacaatctgacataatt
acattagatatctacacctctcttctgccgctcctttcagcgcttcttgaaagcgacatg
gataggcatcaagatatttcacttgaaatgctgctgaagctggttaaagtatttgggtct
atgatatattcttcacggtctgctccagcatcagttggcgtggatattgaggcagagcaa
aggttggagcgctacaatctctgctatgttgaacttgaaaaggtcaaatgttgtctgcct
actctaaccagaaaaggaggatctattgccaaatctgcacaggagctgcttctagtactc
aaagaattttcatga
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