Ipomoea nil (Japanese morning glory): 109159859
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Entry
109159859 CDS
T04663
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109159859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109159859
03400 DNA repair and recombination proteins [BR:
ini03400
]
109159859
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109159859
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109159859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
109159859
NCBI-ProteinID:
XP_019163515
LinkDB
All DBs
Position
Un
AA seq
1235 aa
AA seq
DB search
MAESSKQDIMHDDPSKAFTGVRFVLFGFDPVKKEQVRSKLLDGGGVDVSRYCPDCTHVIV
DKIVYDDPMCVSARRDGKTVVNSLWVDHSSEVGMIVDPASVMYRPLKDLNGIPGAKSLLI
CLTGYLRQDRDDIMTMVGLMGANFSKPLVANKVTHLICYKFEGEKYELAKRMSRIKIVNH
RWLEDCLKSWSLLPETRYDQSGYELEMMEAEAKDSEEEREDVPAGERKLVTTPQNSKSSH
QSLLKQEIQNLTTSNIATSPQNTKSPLQSSLKQDLSRDLNLSASKVLSDQKSSIKPLLSA
GKGSKLSPISGFEQIQNRHPEMIDTREITTFGEKPAGFLLNDNVLASGTTTKQSPPEASK
SCPKSYSRKSLRKFSPVTEVKSNRGSPPSVSAGKHNDGQSLTSLNIEQDGLNTASADAHK
VVASSCGNVQSSILPEKRIMTTPSSSSKMQKITHTQGTGGDSALIVSGTEVLPAVPSGDG
AHETSNHPSRDNGCCPDAKNALDPTNSSPVNICKIATPDSTLQQCSKEALETGLTETMGL
RTCLSSHNTRCKAISPGSSKDGCADVEVQENELQGIKVKSPGSRMEIEKFDDLADMELPK
GGKSNPQSKMLRKRYLSKKTENSKQTSGKGRARNQKGSIYLNKTTVNSTGEEEMKSNEKL
NSEKVDVPAMDNADSSKETGKSRSLESEAEQTEPLFDETEAPDDKEDEFNVAVHRDKSND
IELQHSVDNFVEEEINVHKTDEQITENNSDTGNHPAGHGALKTMVDQTDSVKNATEVKLK
KDKTSPLSTSKKASPIAKKSTESRKGAERKRVINGKSKKGVGKQKRPASSTPAGVNLADT
NKENSYMEVEKENIPAVSREQQNLNDERQGVENMAHKKPCKSNEIVSNAKATGGGLNASP
EEEGVGKMTLGSCKKPCKSNLQVEAVARCFIFSGHRLQRKEFQQVIKRLRGKSCRDSHQW
SYQATHFVAPDPIRRTEKFFAAAASGRWILKVDYLTACNEAGKLLEEEPYEWHGKGLTED
LAISLEAPRKWRLLRQRTGHGAFYGMRIIVYGELLVPSLDTLKRVVKAGDGTILATSPSY
TRVLKSDIDFAIVATGIPRNDAWVQEFLEHKIPCVSADYLVEYVCKPGYSLDKHVQYSTH
AWAEESLKKLVTRCEEVEDLTPSGDDNSSDNILCKVCGSDDATREAMVICGCGVGIHIGC
CNPPLEDVPNEAWHCPECKPNQSGSKKPKRKRCKV
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagtagcaaacaggatataatgcacgacgacccctccaaagcttttacaggc
gttcgtttcgttctattcggcttcgaccccgttaagaaagaacaggttcggtcgaagcta
ttggatgggggtggagtggatgtcagtcggtattgtccagattgcactcatgttattgtt
gacaagattgtctatgatgatcccatgtgtgtttctgctcgaagggacgggaaaacggtg
gtgaatagcttgtgggttgatcatagctctgaagtgggaatgattgttgatccggcttct
gttatgtatagacctttgaaggatttgaatggcattccaggtgccaagtcgctgcttatt
tgcctgactggatatcttcgtcaagacagagatgatattatgacaatggtagggttgatg
ggtgcaaatttttcaaagccattggtagcaaacaaggttactcatcttatatgctacaag
tttgagggggagaaatatgagcttgctaagagaatgtcgcggataaagattgtcaatcat
cggtggttggaggattgtttaaagtcttggagtctacttccagaaactcgctatgatcag
agtggatatgagttggagatgatggaagctgaggctaaggattctgaagaagaacgggaa
gacgttcctgcaggagagagaaaacttgtgaccacaccacagaattcaaaaagttctcat
caatcccttttgaagcaggaaattcaaaatttgaccacttcaaatattgctacctctcca
caaaatacaaaatctcctttgcaatcctcattaaagcaggacctctctagagacctaaat
ttaagtgcatctaaagtgctatcagatcagaagagcagcattaaaccattgttatcagct
ggaaagggatcaaaacttagtcctatctctggttttgaacaaattcagaataggcatcct
gagatgatagacactcgtgaaattacaacttttggtgagaaacctgctggctttctatta
aatgataatgtcttggcatctggcactactaccaagcaatcgcctcctgaggcgtcaaaa
tcttgtcctaaaagttactcgcgaaagagcttaaggaaattcagtcctgttactgaagtg
aaaagcaacagaggaagtcctcccagtgtcagtgctggaaaacataatgatggtcaaagc
cttacatcattaaatattgaacaagatggattaaatactgccagtgcagatgctcataag
gttgttgcatcatcttgtggaaatgtgcaaagttctatattaccagagaagaggatcatg
accactccatctagtagctcgaaaatgcaaaagattactcatacacaaggaaccggggga
gatagtgccttgattgtaagtggaactgaagtgttaccggctgttcctagtggagatggt
gcacatgagacaagtaatcatccttcaagggataatggctgttgtcctgatgcaaagaac
gctttagatcctacaaatagttctcctgttaacatctgcaaaattgcaactcctgattct
actttacaacaatgcagtaaggaagcacttgagactggtttgactgaaactatggggtta
aggacctgcctgagcagccacaatacacgctgtaaagctatttccccaggcagctctaaa
gatggctgtgctgatgttgaagtgcaagaaaatgagctgcaaggcatcaaggtaaaatca
cctggaagcagaatggagattgaaaaatttgatgatttagctgacatggaattgcccaaa
ggaggaaagtccaacccgcagtctaaaatgcttaggaagagatatctttccaagaagaca
gaaaactcaaagcaaactagtggtaaagggcgtgctagaaatcagaagggttctatttac
ctaaacaaaactacagtcaattcaactggtgaggaagagatgaaaagcaatgaaaaatta
aactctgagaaggttgatgttcctgcaatggataatgcagatagtagcaaagagactggt
aaaagtagatctttagaatctgaagctgaacaaactgaacccctgtttgatgagaccgaa
gctccagatgacaaagaggacgagttcaatgtggcggtccatagagacaaatccaatgac
attgaattgcaacattcagtagataattttgtggaagaggaaattaatgtccacaagaca
gatgaacaaatcactgaaaacaactcagatactggtaaccatcctgcagggcatggtgct
ctgaaaacaatggttgatcagactgattctgtgaagaatgctacagaggtaaaattgaaa
aaagataaaacatcccccttgagtactagtaagaaagccagtccaattgctaagaaatct
acagagtctagaaaaggtgctgaaagaaagagagtcataaatggaaaaagtaagaaggga
gtggggaagcaaaaaagaccggcatctagtacacctgcaggagtaaaccttgctgataca
aataaagaaaacagttacatggaagtggaaaaggagaacataccagctgttagcagagag
cagcaaaacttgaatgatgagaggcaaggagttgaaaatatggctcataaaaagccttgt
aagtctaatgaaatagtgagcaatgcaaaagctaccggaggtggtctaaatgcaagccct
gaggaagagggagttggaaaaatgaccctgggatcatgtaaaaagccttgcaagtctaat
ctccaagtggaagctgtggctaggtgttttatattttccgggcataggctacagaggaag
gagttccagcaggtcattaaacgtttgagggggaaatcttgcagagactctcaccagtgg
tcatatcaagcaacacattttgttgctccagatcctattcgcaggactgaaaagtttttt
gctgctgcagcatctggaaggtggatcctgaaggtggattatctaactgcttgcaatgag
gcaggaaaattattggaagaggaaccatacgaatggcacggaaagggattgactgaagat
ttagctatcagcttagaagccccaaggaaatggcggctcctaaggcagagaactggtcat
ggtgcattctacggaatgcggattatagtatatggagagttacttgtgccatcattggat
actttgaagcgtgttgtcaaggctggggatggcactatattggcaacttctccgtcctac
actcgtgtcctcaagtcagatatcgactttgccattgtggctaccggaatcccacgcaat
gatgcgtgggttcaagagtttctggaacacaaaataccctgcgtttcagctgattacttg
gtagagtatgtttgcaagcctggttactccctggacaagcacgttcagtacagcacccat
gcttgggcagaggagtctttaaagaaacttgtaacacgctgtgaagaggttgaagacctg
acaccatctggagatgataatagcagtgacaacatattgtgtaaagtttgtgggtctgat
gatgcgacgagagaagcaatggtgatatgcgggtgtggtgttggcattcatattggctgc
tgcaatcctccgctggaagatgtaccaaacgaagcctggcattgcccggaatgtaaaccc
aaccaaagtggctctaaaaaaccaaagaggaagcgttgcaaagtttga
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