Ipomoea nil (Japanese morning glory): 109160040
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Entry
109160040 CDS
T04663
Name
(RefSeq) syntaxin-41-like
KO
K08489
syntaxin 16
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109160040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109160040
Membrane trafficking [BR:
ini04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
109160040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
EFL1
DGKD_4H
MCPsignal
Motif
Other DBs
NCBI-GeneID:
109160040
NCBI-ProteinID:
XP_019163695
LinkDB
All DBs
Position
Un
AA seq
385 aa
AA seq
DB search
MATRNRNEVFRRHRNTLNQNRIPFTSSSKAFGGDAPVIEMATSSFFNSRRSYAPLSTEDP
GPSTSSYDVHTVGLAPGWVDISEEVAANINQTRVKMAELVKAHAEALTPSFIDGEVDQCR
IEALTQDITDLLRKSEKTLQNLSAGGRSEDSTVKRNVQRSLATDLQNLSMELRKKQSIYL
KCLHQQTEGLDALDWKMNLNGTSCNVDDEISGMGFNEHQMAKLKNNNQFSEDRETEIKQV
MKSVNELAQIMKDISVLVIDQGTIVDRIDHNVQSVAASVEEGTKQLRKVFFCLFLICACM
QDCEQMHRVFYLSVVGRGWGGSCLYRLISKTFEFISPNILMLDYRGLKFQAKRNQKEGGM
VRCATVLFIMCFVLLMLLVFKEILV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagaaacagaaatgaggtattcagaaggcacaggaacactctgaaccagaac
cgcattccatttacttcttcgtcgaaagcattcggcggcgacgctccggttatcgaaatg
gccacttcttcgtttttcaattctcgccgctcgtacgcacccctgagcacggaggatccc
gggccttccacctccagttatgatgtgcatacagtgggtttagctccaggttgggtagat
atttcagaagaagttgctgccaacataaaccagactcgagttaaaatggctgagttggta
aaggcccacgcagaagctttaacgccatctttcattgatggagaagtagatcaatgtagg
atagaggctctgactcaagatattacagatttattaaggaagtcagaaaagacactgcaa
aatctttctgctggtggacgttctgaggattcaactgtcaaacgaaatgtgcagcgatct
ctagctacagaccttcagaacctttcaatggagctccggaagaagcaatcaatatatctt
aaatgcctacaccagcaaactgagggacttgatgcgcttgattggaagatgaacttgaat
ggaacatcctgtaatgtagatgatgaaatcagtggcatgggttttaatgaacatcaaatg
gccaagcttaagaataacaatcagttttcagaggatagagaaacagagattaaacaggtt
atgaagtcggttaatgagcttgctcaaattatgaaagatatctcagtccttgtgattgac
cagggcacaatagttgataggatagatcacaacgttcaaagtgttgctgcatcagttgaa
gaaggcactaaacaattacgaaaggtcttcttctgtctctttctcatatgtgcatgcatg
caagattgcgagcagatgcatagagtattttatctatctgtggttggaagaggctggggt
ggtagttgcttgtaccgactaatatccaaaacattcgaatttatttctcctaatatacta
atgcttgattatcgggggttgaaatttcaggcaaagagaaatcagaaggaagggggaatg
gtgagatgtgcaacagtcctttttatcatgtgcttcgtcttgcttatgttattagtcttt
aaggagatacttgtatga
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