Ipomoea nil (Japanese morning glory): 109160069
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Entry
109160069 CDS
T04663
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109160069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109160069
Spliceosome [BR:
ini03041
]
Complex A
Other components
Complex A specific factors
109160069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
Ras
Motif
Other DBs
NCBI-GeneID:
109160069
NCBI-ProteinID:
XP_019163746
LinkDB
All DBs
Position
Un
AA seq
763 aa
AA seq
DB search
MSIKIGEASHNMQSTTMAPTTSAAKISIFANKSGFVIPKNKLSGSMVPVLRGGKKEGSES
VNEESTKLVRRKTKWGPDLTQDTTVRKGRALAYQTRVDQIAQQLSSGPMDWEENQDRLTA
SSILDYKLDAEKIKSLELEKREAIGEVLKLNPNYKPPAGYKPIQKEGKVPIPIKEHPGYN
FIGLIFGHVSDTHKRLEKETGAKVKVYGIKADTGQKVEVTSADGNESCSSYQEMYVQVLA
DTYEKVDAAVSLIELLVNPVSVKAGSTSMTISSNGMAATDNPGVVQPIAGSGVAPAHGHF
QQYPWFPGSASQNTIATLPGSMSSTDPPAAVVGNPIRVSSLPNPSSTPSLFGSPGMVAGL
GSVPQNPSLVSSRPNTPLVSQQPYMPLTPLGQIGAPRNPLVTASESTAFHQNMVVPPQIS
VNQSMATGTSQVFRPPISNQSLPSAGGHTGWSGWNSPVAQGTNMMPMTPPIAAAQGSHPL
VSNPMGISVAPPVGFPRGNPSGSAPAGIVVNQQPTAQGSHPLVSNQMRHPLPQHPPSGHP
NSTLPPQPVIPNSVTGRASNFDAMNPLSIGAPRPQQSGSSDFIFQPHRPNSASQVIPRPV
SRFDPPNIPLQNQLIQPGHAPQTPSIRPEMRNLNPSHALPSFPELQVNNRMIQRQPVPVN
FSGGPAGPPPPIRPMPFPNSGNPSTISFAHMHPRNFNPVAPPVNSGSYPPRTGNLMFHQN
NPAMMTHPPNFPTSNNEFRPSKPAPGPFGVQQTYDPFSPTSLS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaaaattggggaagcatctcacaatatgcagagcactacaatggctccaaca
acaagtgctgcaaagatctccatctttgccaacaaatctgggtttgtgataccaaagaac
aagttgtcaggttctatggttcctgtccttcgaggaggtaaaaaggagggtagtgagtca
gtaaatgaagaaagcactaaactggtgcggaggaaaactaagtggggccctgatctgaca
caagatacaactgttaggaaaggaagagccttagcatatcagactcgtgttgatcaaata
gcacaacagctgagttcaggacctatggactgggaagagaaccaagacagattaacagcc
tctagtattctggattataaacttgatgctgagaaaataaaatcattggaacttgaaaag
cgagaagccattggtgaagttctaaaactaaatcctaactataagccacctgctggctac
aaacctatccagaaagaaggaaaagttcctatccctatcaaagagcatcctgggtacaat
ttcattggcttgatctttggacatgtgagtgacactcataaacgactggaaaaggaaact
ggagctaaagtaaaagtttatggtattaaagcagatacaggacaaaaggtcgaagttacc
tctgctgatggaaatgaatcatgcagttcataccaggagatgtatgttcaagtgttggct
gatacatatgagaaggttgatgctgcagtgtctttaattgaactgctggtcaacccagtt
tcagtaaaggcaggttctacatcaatgactatttctagtaatggcatggctgctactgat
aacccaggagtggttcaaccaattgcagggtctggggttgctccagcacatggccatttc
caacaatatccatggtttcctggaagtgcatctcagaatacaattgctacactaccggga
tcaatgtcctctacggatcctccagctgctgtagttggcaacccaatcagagtatcttca
ctgccaaacccctcaagtacaccctcactatttggctcaccaggtatggtagctgggctt
ggttcggttcctcaaaatccttcacttgtatcttcaagaccgaatacacctctagtttct
cagcagccatacatgcctctcactccacttggacaaattggtgctcctagaaatcctctg
gtgactgcttctgaatctacagcttttcatcagaatatggtagttccacctcaaatatct
gttaaccaatccatggcaacagggacctcacaagttttcagaccgcctatctctaaccaa
tcactgccttctgctgggggccatactggatggtcaggatggaactctccagtggctcaa
ggtacaaacatgatgccaatgactccaccgattgctgccgcacaaggaagtcatccattg
gtctcaaatcccatgggtatttctgttgcaccaccagtaggctttccacgtggtaatcct
tctggttctgcaccagctggtatagttgttaatcagcagccaaccgcacaaggaagtcat
ccattggtctcaaatcaaatgcggcaccctcttccacaacatccaccatctggtcatcct
aactcaacacttccaccccaacctgtaatcccaaactctgtaactggaagggcttcgaac
tttgatgccatgaatcccctttctataggtgctccaagaccacagcaatctggttccagt
gattttatattccagcctcacaggccaaattctgcctctcaagttattccaaggccggtt
agtcgttttgatcctccgaatattccattacaaaaccaattaattcagccaggtcatgca
cctcagaccccatctattagaccagaaatgcgcaacttgaacccctcacatgcattgccg
agtttccctgaactccaagtaaacaacagaatgattcagcggcaacctgtaccagtcaac
ttttctggaggtcctgctggccctccacctccaattaggcccatgccatttccaaattca
ggtaatccatctacaatttcttttgctcacatgcatccaaggaacttcaatccagtggct
ccaccggtgaactctggtagttatcctcctagaacaggaaacctgatgtttcaccagaat
aatccagcaatgatgactcatccaccaaactttccaacttcgaacaacgaatttcgaccc
agtaagccagcccctggcccttttggagtgcagcaaacatatgatcccttttcaccaaca
tctctctcttaa
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