KEGG   Ipomoea nil (Japanese morning glory): 109160253
Entry
109160253         CDS       T04663                                 
Name
(RefSeq) DNA mismatch repair protein PMS1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03430  Mismatch repair
ini03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109160253
   03460 Fanconi anemia pathway
    109160253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ini03400]
    109160253
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     109160253
SSDB
Motif
Pfam: DNA_mis_repair MutL_C HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 109160253
NCBI-ProteinID: XP_019164071
LinkDB
Position
Un
AA seq 929 aa
MEGGAASSSDSPTIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEVALKDY
GGESFQVIDNGCGISPHNFKVLALKHHTSKLSDFPDLQSLTTFGFRGEALSSLCALGDLT
VETRTRNEPVATHLIFNHSGLLIEETKTARQVGTTVTIKKLFSNLPVRSKEFHRNIRKEY
GKLITLLNAYALIAKGVRLLCSNTTGRNAKSVVLKTQGNGSLKDNIIAVFGMSTFSCLEP
VKVCVQDGCTIDGFISKSGNGSGRNSGDRQFFFVNGRPVDMPKISKLINELYRAANSKQF
PIAIMDFIISPRAYDVNVTPDKRKLFFSDECSILRSLREALEKIYSPDLASYSVNTLEDI
TQEKHNLKSYSHHGRSEELRLKKIFSDGTVSDGQSDSREKSAGGEILRTVEEDIGGSPDA
VVMQNNEVSSTTKDFRLRFHCTEKNSQHCGSPEKQLMDLTSNVTDNHALLCPRSVEKGSN
KEASFMGRSNIMQSSLTKFVTVNKRKHDSISSPLSEVPVLRNGSIQSTENNSAKHKTFSR
PAEDYNMVDDSDESNNNRSESPALSKLDKILNHMKNVIPNSERKPRGENIEEKNGEKKEL
PSTGSELDASYSKYFPDVSEDITDATPQQPYGVSSDSHKVSSDSKIGPTMQFSFKDLMKR
RKQRLARLQLNATASRHMEMQRGYAAASLELSQPLNEEGKTKALAAATSELERLFRKESF
AQMKVIGQFNLGFIIGKLDRDLFIVDQHAADEKYNYERLSESTILNQQPLLRPLKMDLSP
EEEIVVSMNMDTIRKNGFSLEEDLHAPPGLRFNLKAVPFSKNITFGVADVKELISILASS
QEDCHITLSYRKDTSDSICPPRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAHLKSP
WNCPHGRPTMRHLIDLTTVHKRLDPDPTL
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggagggaggagcagcttcatcttccgattccccaaccatcaagcccatcaacaagggc
gtcgttcaccggatttgtgctggccaagtcattctcgacctttcctctgccgtcaaggag
ctggtggagaacagcttagacgccggcgccaccagcatcgaggttgccctcaaagactac
ggcggcgaatcattccaggtcatcgacaatggttgcggcatttctcctcacaattttaag
gttctcgctctgaagcatcatacatcaaagctatcagattttcctgaccttcagagttta
actacttttgggttcagaggggaggcattgagttccctttgtgctttaggggatttaact
gtggagacaagaactaggaatgaaccagtggcaacacacttgattttcaatcattctggg
cttctaatagaagaaacaaagaccgcaaggcaagttggtaccacagtcaccattaagaag
ttattctccaatttacctgtaagaagtaaggagttccatcgcaacattcgcaaggaatat
gggaagcttatcactttgttgaatgcctatgctctgattgctaaaggagttagattgctt
tgctccaatacaactggaagaaacgcgaagtctgtagtactaaagacacaaggaaatgga
tccctgaaagataacatcatagcagtatttggtatgagcaccttttcctgtttagagcct
gttaaagtatgtgtacaagatggttgcacaattgatggcttcatttccaagagtggaaat
ggaagtgggcggaattcgggagaccggcaattcttctttgtaaatggtcggccagtagat
atgcccaaaatcagcaaactcataaatgaactgtatagagctgcaaacagcaagcaattt
ccaattgcaataatggacttcataatttcacctagagcctatgatgtcaatgtaactcct
gacaaaagaaaactatttttttctgatgaatgctccatattgcgctccttaagagaagct
ttagaaaagatatattcacctgaccttgctagctattctgtgaatacattggaggatatc
acacaagaaaaacataatttgaagtcttattcccatcatgggaggtcagaagagctaaga
ttaaagaaaattttttctgatggcactgtttcagacggacaatcagacagcagagaaaaa
tctgcaggtggtgagattttgagaacagtagaggaggacattggcggttctcctgatgca
gtggttatgcagaataatgaggtcagttcaaccacaaaggactttaggctaagatttcat
tgtacagagaaaaatagtcaacactgtgggagtccagagaagcaacttatggatctgaca
agtaatgtgactgataatcatgctttgctatgtccaagatctgtggaaaaaggcagtaac
aaagaggcaagtttcatgggtcggtcaaatattatgcagtcttcacttaccaaatttgtg
acagtgaataagagaaagcatgacagtattagttcgcctctgtctgaagtaccagtactc
agaaatggatctatccaatcaacagaaaacaactctgcaaaacacaaaacattctcaaga
cctgcagaggactataatatggttgacgattctgatgaatctaataacaataggtcagaa
tctccagctttgtctaaattggacaaaatccttaatcatatgaagaatgtgattcccaac
tcagaaagaaagccccgaggagaaaacatagaggaaaaaaacggtgaaaagaaagagttg
ccctctactggttctgaattagatgcttcatatagcaagtactttccagatgtgtcagaa
gacatcacagatgccactccacaacaaccttatggtgtatcatctgattctcataaggtt
tcttctgactcaaagattggtcctaccatgcaatttagttttaaagacttgatgaaaaga
aggaaacagaggctggcaagattacaactcaacgctactgcctctagacacatggaaatg
caaaggggttatgctgctgcatcactggagctctctcaacctcttaacgaagagggcaag
acaaaagctttggctgctgcaacctctgagttggaaaggctgttcaggaaagaaagcttt
gctcaaatgaaggtcattgggcaattcaatcttggatttatcattggcaagttagatcga
gacctttttattgttgatcagcatgccgcagatgaaaaatataactatgaacgattatca
gagtcaacaattttaaaccagcaacctttgcttcggcccttgaagatggatttatctcct
gaagaggaaatagttgtttccatgaacatggacactataaggaaaaatgggttttccttg
gaagaagatttgcatgctcctcctgggcttcgcttcaatctaaaagcagttcctttcagt
aaaaacataacttttggagttgcagatgtgaaggaactaatttctattcttgccagcagc
caagaagactgtcatatcacgcttagttacagaaaggatacatctgattcaatttgcccc
cctagagtacgtgcaatgttagcatcacgagcttgcagatcatctgttatgattggagat
ccactggggagaaatgagatgcaaaagatacttgaacatttggcacacttgaagtctcct
tggaactgtccgcatgggagaccaacgatgcgtcacttgattgacttgaccactgtacat
aaaaggttagatccagatccaacattgtga

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