Ipomoea nil (Japanese morning glory): 109160282
Help
Entry
109160282 CDS
T04663
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109160282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109160282
03036 Chromosome and associated proteins [BR:
ini03036
]
109160282
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109160282
Coactivators
SAGA/TFTC/STAGA complex
109160282
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109160282
STAGA complex
109160282
TFTC complex
109160282
SAGA complex
109160282
SLIK complex
109160282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
DUF5814
Motif
Other DBs
NCBI-GeneID:
109160282
NCBI-ProteinID:
XP_019164123
LinkDB
All DBs
Position
Un
AA seq
649 aa
AA seq
DB search
MAENPSSSPKPMQSGNQVMEASNTQLQTVAAAGAAGTVSNTGIPMASPSNSISHSPSVDL
PQIPMTPSQQQPQMLQQQQQQQQQMQQLQQQSSNSNNNNNSSSNNNNNMMAAAMASNFQM
QQSLQRSPSMSRLSQVQQQQQQQFGMTRQQMAAGLYGQMNFGGGGGGVPQQQQQQPQQQQ
QQNPQQQQMGQMVGGGNLSRSALIGQTGQLSMLPGQNVMAAAAATAQFNLQSQFLSTPRQ
KTGLVQGSQLHSGSSHGQPLQGIQAMGMMGSLNLSSQLRANGSLYAQQRMNPAHLRQQVS
QQTPLTSNQTLQAQNLQRTSFMNSQLSGLTPNVQSAMIQNTLAQQQWLKQMPTLSSSPNS
PSFRLQQQQRQLLIQQQLASNQQLHQNSMGLNQQQLSQIVQQQQMGHPQMQQQQAPPAPA
QQQSQPADQQQQQPGQQLLHQQQQSSPHMVAPTCQKSMSLTGSQPDATASGATTPGGSSS
QGTEASNQLLGKRKIQDLVSQVDSLGKLDPNVEELLLEFADDFIDSVTTFACNLAKHRKS
STLESKDVLLHLEKNWNLTIPGFSSEEKKQQSEHLQPSSDIHKKRLDVIRSLMEASHAET
STSANNAKQMVRQGMGDHIGQNHMIRAPSSEQLVSQANASKMLQQMTRF
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatccatcgtcatccccgaaaccaatgcaatcaggaaatcaagttatggaa
gcgtcgaacacgcagttacaaacggtcgctgcggccggggcggctgggacagtgtcgaat
actggaatccccatggcctcgccgtcaaattcaatttcccactcgccttccgttgacctc
ccgcaaatccccatgaccccatcgcaacaacagccgcagatgcttcagcaacaacaacaa
cagcagcaacaaatgcagcagcttcagcagcagagtagtaatagcaacaacaataacaat
agtagcagtaacaacaataataatatgatggcggctgccatggcgtctaattttcagatg
cagcaaagcttgcagagatcgccctcaatgtcgaggttgagtcaagtgcagcaacagcag
cagcagcagtttggtatgacgagacagcaaatggcggctgggctttacgggcagatgaat
tttggtggtggcggtggcggtgtacctcagcaacagcagcagcaaccccaacaacaacag
cagcagaatccccaacagcaacaaatggggcagatggttggcggtgggaatttatctaga
tcggcattgatagggcagaccgggcaactctccatgttacctggacaaaatgtcatggct
gctgctgcggcgactgcccaatttaatttgcagtctcaatttttgtcaacgcctcggcag
aagactggtttggtgcagggatctcagctgcattcagggagctcccatgggcagccattg
cagggaattcaggcaatggggatgatgggatctctaaatttgagctctcaacttagagcc
aatggatccctttatgcccagcaaaggatgaacccggcccacctgaggcaacaagtgtct
cagcaaactccgctcacctccaatcagacattacaggcacagaaccttcaaaggacgtca
tttatgaattctcagttatctggattgactccaaatgttcaatctgctatgatacagaac
actttagctcagcaacagtggttaaagcaaatgcctacattatcttcttcaccaaattcc
ccttcattccgtcttcagcagcagcagaggcaattacttattcagcagcaattagcttca
aatcaacagttacatcaaaattcaatgggtttgaaccaacaacagttatcccaaattgta
cagcagcaacaaatggggcatccccagatgcagcagcagcaggcaccgccagcaccagca
cagcaacagtcgcagccagcagaccagcagcaacaacagcctggacagcagcttttgcat
caacaacagcagtcttctccacatatggttgcccccacatgccaaaagtcaatgagttta
actggatcacaaccagatgctactgcatctggagccactactcctgggggaagctcaagc
cagggaactgaagcaagcaaccaacttcttgggaagagaaaaatacaggatctagtttca
caggtggattctctgggtaagcttgatcctaatgttgaagaacttcttttagagtttgct
gatgacttcattgattcagttactacattcgcttgcaatttggcgaagcatagaaaatca
tcaaccctggaatcaaaggatgtattgttgcatctagaaaagaactggaacctgacaatt
ccaggcttctcaagtgaggagaagaaacagcaatcagagcatttgcagccatcaagtgat
atccacaaaaagcgcttggatgtgatacgttcattgatggaagcttcacatgctgaaaca
agcacaagtgcaaataatgctaagcagatggttaggcaggggatgggtgatcatattggt
caaaaccacatgataagagctccaagttcagagcagttggtttcacaggctaatgcttct
aagatgttgcaacaaatgactcggttttga
DBGET
integrated database retrieval system
