Ipomoea nil (Japanese morning glory): 109160289
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Entry
109160289 CDS
T04663
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03030
DNA replication
ini03410
Base excision repair
ini03420
Nucleotide excision repair
ini03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109160289
03410 Base excision repair
109160289
03420 Nucleotide excision repair
109160289
03430 Mismatch repair
109160289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109160289
03036 Chromosome and associated proteins [BR:
ini03036
]
109160289
03400 DNA repair and recombination proteins [BR:
ini03400
]
109160289
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109160289
DNA Replication Termination Factors
ELG1-RFC complex
109160289
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109160289
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109160289
Check point factors
HRAD17(Rad24)-RFC complex
109160289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Viral_helicase1
Rad17
RuvB_N
RCF1-5-like_lid
AAA_11
AAA_5
AAA_19
AAA_24
AAA_assoc_2
AAA_25
nSTAND3
AAA_28
AAA_30
DNAX_ATPase_lid
MeaB
ABC_tran
AAA_18
IstB_IS21
bpMoxR
AAA_3
NTPase_1
RNA_helicase
Rotavirus_VP3
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
109160289
NCBI-ProteinID:
XP_019164135
LinkDB
All DBs
Position
Un
AA seq
331 aa
AA seq
DB search
MASSSSAASGPEIPWVEKYRPTKVVDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTTGAQQALRRTMEIYSNSTRFGLACNTSSKVIEPIQSRCALVRFGRLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFGFVNQENVFKVCDQPHPLHV
KNMVRNVLEGKFDDSCVGLKALYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
HMRICEGVGSYLQLCGLLAKLALARETAKAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcttcttctgctgcgtcaggccccgaaatcccatgggtcgagaagtacagg
cccaccaaggtggtcgacatcgtcggcaatgaagacgccgtcgccaggctccaagtcatc
gcccgtgacggaaacatgcccaatctcattttagctggtcctcctggcactggtaaaact
accagtatacttgctcttgctcatgaacttctgggaccaaatttgaaggaagcagttctg
gagctaaatgcatcagatgatagggggattgatgtcgttagaaacaagattaagatgttt
gctcagaagaaagtcactcttccccctggccgccataagattataattttggatgaagct
gacagcatgacaactggagctcaacaagccttaaggaggacaatggaaatatattctaac
tcgacacgctttggtcttgcctgtaacacttcttctaaagtcattgagcctatccagagt
agatgtgccttagtccggtttggcagattatctgatcaagagatccttggacgacttatg
gtagtggttgctgcagagaaggttccttatgtaccagaaggtcttgaggcaatcatattt
actgctgatggagatatgagacaggctttaaataacctgcaagcaacatacagtggattt
ggttttgtcaaccaagaaaatgttttcaaggtatgtgaccaaccccatccccttcatgtg
aagaatatggtacgcaatgtacttgaagggaaatttgacgattcttgtgtgggtttaaag
gcgctatacgacatgggctattctcccactgacattatcacaacccttttccggattata
aagaactatgatatggcagaatatctgaaattggaatttatgaaggaaactggatttgca
catatgaggatatgcgagggagtgggatcgtatcttcagctatgcggtttgctagcgaaa
cttgcattggctcgggagactgcaaaggcagcatga
DBGET
integrated database retrieval system
