Ipomoea nil (Japanese morning glory): 109160504
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Entry
109160504 CDS
T04663
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109160504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109160504
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109160504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
LRR_FBXL18
Motif
Other DBs
NCBI-GeneID:
109160504
NCBI-ProteinID:
XP_019164338
LinkDB
All DBs
Position
Un
AA seq
581 aa
AA seq
DB search
MAYSFPEEVLEHVFSFLSSDKDRNAVSLVCKSWFEIERWCRRRIFVGNCYAVSPSIMIRR
FPEVRSLELKGKPHFADFNLVPENWGGFVFPWVVAMSRAYPWLEEIRLKRMVVTDETLEL
IARSFKNFKVLVFAFCEGFTTDGLAAITANCRNLKELNLRECDVEDLSGYWLSHISENCT
SLVSLDITCLSCEVSFSALERLVSRCPNLRTLRLNRALPLEKLHILLRRAPQLVELGTGA
LSAEVRSDTFSNLADAFSGCKQLKGLSGFWDVTPAYLPAIYPVCYGITSLNLSYATIQSP
DLFKFVSQCHNLQRLWVLDYIEDIGLEAIAASCKDLQELRVFPSDPFGADPNVILTEQGL
VAVSEGCPKLQSVLYFCRQMTNAALDAIARNRPNMIRFRLCIIEPRAPDYLTLEPLDTGF
GAIVQHCKDLRRLSLSGLLTNRVFEYIGSHAKKLEMLSIAFAGDNDLGLHYVLSGCESLR
KLEIRDCPFGDKALLANAAKLEKMRSLWMSSCSVSFRACKLLGQKMPRLNVEVIDERGPP
NSRPEDDPVEKLYIYRTVAGPRFDTPGFVWTMHEDAALRFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagtgttggagcacgtcttctcgtttctgagctccgac
aaggaccggaacgcggtgtcgctggtgtgcaagtcgtggttcgagatcgagaggtggtgc
cggaggaggatattcgtcgggaactgctacgccgtgagccctagcatcatgatccgccgc
ttcccggaggtccgatcgctggagctcaaggggaagcctcatttcgcggacttcaatctg
gttccggagaactggggcggcttcgtcttcccctgggttgtcgccatgtcccgcgcgtac
ccttggctcgaggagattaggctcaagagaatggtcgtcacggacgagaccttggagctc
atcgccaggtcctttaagaacttcaaggtcctcgtctttgcgttttgcgaggggttcact
acggatggactcgccgccataaccgccaattgcaggaatttgaaggaactaaacctgcgg
gagtgtgatgtggaggacctaagtgggtattggcttagtcatatctctgagaactgcacg
tcgctcgtgtctcttgacataacttgcttgagctgtgaggtgagcttctcagctctggag
cgattggtttccaggtgtcctaatctaaggacgcttcgcctcaaccgtgccctcccacta
gagaagcttcacatccttcttcgccgtgctccccagttggttgagttgggcacaggtgcc
ctctcggctgaggtccgttccgatacattttccaacctggcagatgctttttcaggctgt
aaacaacttaagggtttgtctgggttttgggacgtgactcctgcttaccttccagcaata
tatccagtctgctatggaattacgtctttgaatttaagctatgctactattcaaagcccg
gatcttttcaagtttgtaagccagtgtcacaacttgcagcggctatgggtactggattac
attgaagatattggtctagaggctattgctgcgtcttgtaaggatcttcaagaactcaga
gttttcccatctgacccttttggagcggatccgaatgtaattttgacagagcagggtctt
gtagctgtctccgagggctgccccaagctgcagtcagtattatacttttgccgccaaatg
acaaatgcagcactagatgcgattgctcggaaccgccctaatatgatccggttccgtctc
tgcattatagagcctcgagctcctgattatcttaccctagaacctctagatactggtttt
ggggccattgtacaacactgcaaagatttgcggcggctttccctctctggtctgctcact
aatagggtgtttgagtacatcgggagtcatgctaagaaattagagatgctctctatagct
tttgccggggataatgatctgggcctccattacgtgctatcagggtgtgaaagcctgcgg
aagttggagatcagagactgccctttcggggataaggctctcttggccaatgctgcaaag
ctggagaaaatgcgatccctttggatgtcttcttgctcagtaagttttagagcatgtaag
ctcttaggccaaaagatgcctaggcttaacgtcgaagttatagatgagaggggccctcca
aattcaaggccagaagatgaccctgtcgagaaactctacatttaccgaacagttgcaggt
ccaaggttcgatacgcctggatttgtttggacaatgcacgaagacgcagcattgaggttt
tcttaa
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