Ipomoea nil (Japanese morning glory): 109160906
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Entry
109160906 CDS
T04663
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109160906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109160906
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109160906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF6842
Motif
Other DBs
NCBI-GeneID:
109160906
NCBI-ProteinID:
XP_019164712
LinkDB
All DBs
Position
Un
AA seq
773 aa
AA seq
DB search
MATGFSFSNSSSSSSPLSFTSTPSAAATTSSSSPFGFSMSNPSFATSSTSFGFGTASSAP
AFSFGSSAATTSSVTTGTTLPFGPSVGTTPTIFGANSSSGASAFGSGVVTTSFGSSATTA
SSATTGSTSPFGSGAFTTSNAFGASLGSGSSTNLFGSASSLQTTTSVSSPMFGATTSFGA
STPFGSSSGSSSLFGAGLGSGSSSNSGTVPSTVSPFGTSAPAFGASSALSTPVFSVSSAS
SSASSASGFLFPTTAAGSLPSSSFSSTGVVSSASTASFSSASFPSSGSSAPSFSFPTAST
TSSASSAPAFSLPNTSSVTSTPSMPAFSLSSASILSSTASAAPTFSFSITPGSSSSASSA
SSSPFLSTSGSTFSFSNVAGTASTTSVSSVTIPSLNSSSSGVSAFSFGTSSSLQTSTLVS
ATSSSVASKPAALNLSTVSSPQFSTVTTTASASIPAGSVASSAASSTGLSSTFPAVAGSS
SSATSATAISGFSTTNAPSFTVPASSFSMSLKTPSTAPSSQPQSSSLPILGGFTSNSTSA
AQTASAPIATTSSGTTLSTSAATGTSPKLPSEITGKTIEEVIKEWNAELQDRTTNFRKQA
NAIAEWDRRILQNRDVLLKLESEVAKVVETQASLDRHLELIETHQDEVDKALQSMEEEAE
RIYKDEREMLLDDEAAYTRDAMYEQAEFVEREMEKMMEQIKLIINSLNANQGGELTDGVN
PLDVVVRILNNQLSSLVWIDEKAEDLSSRIQTLARQGSSADRGLTGPRFLFTN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcttctctttttccaactcttcatcatcttcctcacctttatccttcacc
tcaacccctagtgccgctgccaccacctcatcctcgtccccatttgggttttctatgtca
aaccctagcttcgctacttcatccaccagttttggatttggcactgcctcttctgctccc
gcattttcttttggttcttctgctgccacaacttcatctgttactactggtactactttg
ccatttggacctagtgtgggtaccactccaaccatatttggagctaattccagttccgga
gcatcagcatttggatctggtgtggttaccacttcttttggttcttctgccaccacagct
tcatctgctactacaggttctacttcaccatttggatctggcgcgtttaccacttccaat
gcatttggagcttctttgggttctggatcttcaacaaatttatttggatctgcttcttcc
ctccagaccacaacctccgttagttccccaatgtttggagcaacaacttcttttggagct
tctacaccttttgggtcttcctcaggctcatcaagtttgtttggtgcaggtttgggctct
ggatcttcatctaattcaggtacagtgccctctactgtatcaccgtttgggacatcagct
cctgcttttggagcatcatcagctttgtcaacccctgtattttcggtatcttcagcttca
agctcagcttcttctgcctctggttttctgtttcccaccacagcagctggcagtttgcca
tcatcttcgttttcatctacaggcgttgtgtcttcagcatcaacagcatcattttccagt
gcttccttcccaagctcaggatcttctgcgccatcattttctttcccaacagcttccacc
acaagttcagcatcttcggcaccagcattttctttgcccaacacctcaagtgtgacttca
acgccttccatgccagcattctcgttatccagtgcttcaattttgagttcgacagcatct
gctgcacctacattttcattttccattactcctggctcaagctcctcagcatcttctgca
tcttcatcacccttcttgtccacttcgggctcaacattttcattttcaaatgtggctgga
actgcttcaaccacttcagtttcttccgtcacaattcctagcttgaattcatcatcttcg
ggtgtatctgccttttcgtttgggacttcatctagtcttcaaacatcaacattagtgtca
gctacctcgagtagtgtagcttcaaagcctgctgctttaaacctttcaactgtttcatca
cctcagttttcaacagttactacaaccgccagtgcttcaattcctgctggtagtgtggca
tcttctgctgcttctagcactggtttgtcttcgacatttcctgctgttgctggttcttct
tcttcagctactagtgcaactgctatttctggttttagtaccacaaatgcaccttcattt
actgtgcctgcgagctctttttcaatgtctttaaaaacaccatcaactgctccatcttca
caaccgcagtcaagttcattaccaatccttggtggattcacttctaattccacttctgct
gctcaaacagcatctgctccaatagcaacaactagtagtgggactacgctgagtacaagt
gctgcaacagggacctcacctaagttaccatctgaaattactggaaaaactatagaggag
gtcatcaaggaatggaatgcagagctgcaggatcgcacgacaaatttccgaaagcaagcc
aatgcaattgctgaatgggacaggaggatcttacaaaaccgtgatgtcctccttaagctt
gagagtgaagttgcaaaggttgttgagacacaggctagcctagatcgacatcttgagtta
attgagacacatcaagatgaggttgacaaggcattgcagagtatggaagaagaagctgaa
cggatatataaagatgagcgtgaaatgcttcttgatgatgaagctgcatatacaagagat
gcaatgtatgaacaggcagaatttgtagagagggaaatggaaaagatgatggagcagata
aagttgatcattaattctcttaatgcaaaccagggtggagaactaaccgatggcgtgaat
ccacttgatgttgttgtccgcattttgaacaatcagttgagttcactggtctggattgat
gaaaaggctgaggatctctcttcacgtattcagacgcttgcaaggcaaggctcttctgca
gatcgtggattgacaggaccccggtttttgtttaccaattga
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