Ipomoea nil (Japanese morning glory): 109161155
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Entry
109161155 CDS
T04663
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03020
RNA polymerase
ini03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109161155
09124 Replication and repair
03420 Nucleotide excision repair
109161155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109161155
03400 DNA repair and recombination proteins [BR:
ini03400
]
109161155
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109161155
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109161155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
109161155
NCBI-ProteinID:
XP_019165051
LinkDB
All DBs
Position
Un
AA seq
319 aa
AA seq
DB search
MEGASYQRFPKIKIREVKDDYMKFELRDTDASVANALRRVMIAEVPTIAIDLVEIECNST
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCITDQTLDV
TSKDLLSSDHTVVPVDYSDPSSGFGNSESKGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIYINEDMMDTLTLEEKRSIVDSSPTKVFDIDPVTQQIVVVDAEAYTY
DDEVLKKIASMDKPGLIEIHAKEDSFIFTVESTGAIKASQLFLNAIDVLKRKLDAVRLSE
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgcatcgtaccagaggttcccaaagataaaaatccgggaagtgaaggacgac
tacatgaagtttgagcttcgcgacaccgacgctagcgtggccaacgcgcttcggcgcgtg
atgatcgccgaggtgcccaccatcgccatcgacctcgtcgaaatcgagtgcaactccacc
gtcctcaacgacgagttcatcgcccaccgcctcggcctcatccccctcaccagcgagcgc
gctatgagcatgcgcttctcgcgtgactgcgacgcctgcgacggcgacggccagtgcgag
tattgctccgtcgagttctacctccgcgtcaagtgcatcactgaccaaaccctagatgtc
accagcaaggacctcctcagctccgaccacaccgtcgttcccgtcgattactctgatcct
tcgtccggcttcggtaattccgagtctaaggggataattattgttaagctacgccgtgga
caagagttgaggctcagagcaattgcacggaaaggaattggcaaggatcatgcaaagtgg
tcacctgcagcaactgtgacatttatgtatgagccagaaatctatatcaatgaagacatg
atggacacattgacacttgaggaaaaaagaagtattgttgacagcagtcccaccaaagtg
tttgacatcgaccctgttacccaacagattgttgtggttgatgctgaggcatacacctac
gacgatgaggtgctcaagaaaattgcgtctatggacaaacccgggcttatagaaatccat
gccaaggaagatagcttcatcttcacagtcgaatccacgggtgcaatcaaagcttctcag
ctcttcctcaatgcaatcgatgttttgaagcggaagttagacgcagtgcgcctgtcagag
gatacggtggaagcagatgaccaatttggagagttgggtgcacacatgcgagggggttaa
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