Ipomoea nil (Japanese morning glory): 109161393
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Entry
109161393 CDS
T04663
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109161393
Spliceosome [BR:
ini03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109161393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
109161393
NCBI-ProteinID:
XP_019165308
LinkDB
All DBs
Position
Un
AA seq
840 aa
AA seq
DB search
MLQCSHTATQLTVSLSSCSRQETHNIRSLPKFSMRTAFSFLHTFSVSVLLNTTRSGRRNR
RGLFCTVSLLRNSSATSPHLRFYPRRIVYCSTLRSSSPSASTFFEQLAYEPEESLKHEED
LSSSTERESFNFDSSFESVELKRFDSPVVDVKELEELPEQWRRSRLAWLCKELPAHKHNT
LIRILNAQRKWLRQEDATYIICHCMRIRENESAFRVYKWMMLQHWFQFDFALATRLADYL
GKERKYLKCREVYDDILNQGRVPAESTFHILVVAYLSSSGQSVVEEAFSIYSRMIQLGGY
RPRLSLQNSLFKALVGKQGGSFEETLKQAEFIYHNLTTSGLQIHKDIYGGLIWLHSYQDL
IDKDRIALLRTEMRLRGIEESTDVLVSVLRACSKDGDVEEAERNWSKLLSSNPSPPPQAF
MFRMVTYAKIGELMKSLEIFRRMQEELGSTAVIAYHKIIEVLSKAEKLELAESIMTEFID
SGLGPLRPSFIDMMEMYSTLGLHEKLESTFFQCLKKCRPNRKVFSIYLDSLVQIGSINKA
GEVFNQMIENTSIGVNAHCCNSILRGYLSQGEHIKAEKVYGLMRLKKYDIDSSLIEKLSF
VLSLRQKDVKEPIRQKLSIEQREVMVGLLLGGLQIKSDAERKKHLVHFEFSENLKHHSVL
RRHIYDKYREWLACPDKLADDDDDDDDVPWVFTTIPHSYFGFYADQFWRKGQPTIPKLIH
RWLSPRVLAYWYMYSGYRTSSGDILLRLKGSQEGIESIVKTLKAKSLDCRLKRKGSSFWI
GFLGDKSTWFWKLVEPFILDDLKDCLRPGGNLSDDLEGIQTIDSGSESDEKPSECSDGEM
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgctacagtgcagccatacagcaacccagctgaccgtcagtctctcttcatgttctcgt
caagaaacccacaatatccgcagtttacccaaattttccatgcgcacagcattcagcttc
ctccacacattctccgtctccgttctcctgaacaccactcgcagtggccgtcggaaccga
cgcggcctcttctgcacggtgtctctgctccggaactcctcagcaacgtctccccatctt
cgattctaccctcgtcgcattgtatactgctccacgctccgctcatcctctccttcggct
agtactttcttcgaacagctagcgtacgagcctgaagaatccctgaaacatgaggaggac
ttgtcgagcagcactgagagggaaagtttcaattttgatagctccttcgagtctgtcgag
ttgaagcggttcgattcgccggttgttgatgtcaaggagcttgaggaacttcccgaacag
tggcgccggtcaagattggcctggctttgcaaggagcttcctgcgcataagcataatact
ttgattcggattctcaatgctcagaggaagtggctcagacaagaagatgctacttatatt
atctgtcattgtatgcgaattcgtgaaaatgagtctgctttcagggtgtacaaatggatg
atgctgcaacattggtttcaatttgattttgctctagctacgaggctagcagattatttg
ggtaaggagcgcaagtacttgaagtgccgggaggtttatgatgacatacttaatcaagga
cgagtgcctgctgagtcaactttccatattctggtagttgcatatcttagttcatctggt
caatcagttgtggaagaagcattcagcatttacagccgcatgatccagctgggaggttat
aggcctcgtcttagcttgcagaattctctgtttaaagctctggtgggaaaacaaggaggt
tcttttgaggaaactcttaaacaagcagagtttatttatcacaatttgactacttctggg
ctccagatacacaaggatatctatggtggtcttatatggctccacagttatcaggattta
atagataaggatagaattgcattattgagaacagagatgcgtttgagagggattgaagaa
agcacagatgtacttgtgtcagtcttgagagcttgctcgaaggatggggatgtagaggaa
gctgaaagaaattggtcaaaacttctttcctctaatcctagtcctccaccacaagctttt
atgtttagaatggtaacctatgcaaagattggagagcttatgaaatctttggagatattt
aggcgaatgcaagaggagttgggttctactgctgtcatagcatatcataaaatcatagag
gtgttgtctaaagctgaaaagctagaattggcagagtcgatcatgacagagttcattgac
agtggtctggggccgttgcggccatcatttattgatatgatggaaatgtactccacttta
ggcttacatgagaaattggagtcaactttctttcagtgccttaaaaaatgccgtccaaat
aggaaagttttcagcatttacttggattcattggttcaaattggcagtattaacaaggca
ggagaagtcttcaatcagatgattgagaacacgtcaattggtgtcaatgcacattgttgc
aatagcattttgagaggttatctctcccagggggagcatataaaggcagaaaaagtgtat
gggttgatgcgcctgaagaaatatgatattgattcttccttgatagaaaagctcagtttt
gttctgagtttgcgccagaaggatgtcaaagaacccataaggcagaagctcagcatagaa
cagagagaggtcatggtggggttgttgttgggtggtttgcaaattaaatcagatgcagag
aggaagaaacatttagtccattttgaattcagtgaaaacttgaagcatcattccgtttta
aggaggcacatatatgacaagtatcgtgagtggttagcttgtccagataaactggcagat
gatgatgatgatgatgatgatgttccttgggtgtttactaccattccacattcttatttt
ggcttttatgccgaccaattctggcgaaaaggccaacctactattccaaaactaatccac
agatggttgtcaccccgagttcttgcttactggtatatgtactcaggctaccggacatca
tcaggggatattctgttgagattaaaaggaagccaagagggcattgaaagtattgtcaaa
acactcaaggccaaatcattggattgcagactaaaaaggaagggaagctcgttttggata
ggttttctgggagataagtctacatggttctggaaactggttgaaccctttattctcgat
gatctaaaagattgcctgagaccaggaggcaacctatcggatgatttggaaggaattcaa
accattgacagcgggtctgaatctgatgagaagccctccgagtgcagtgatggtgagatg
taa
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