Ipomoea nil (Japanese morning glory): 109161581
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Entry
109161581 CDS
T04663
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109161581
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109161581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_VPS8
PQQ_2
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
109161581
NCBI-ProteinID:
XP_019165585
LinkDB
All DBs
Position
Un
AA seq
603 aa
AA seq
DB search
MRNRAATGLDTAVVDVWKREIGQLSTRKFSLRLAAPEDLVQRLEIFRKLEKHGGCVNTVS
FNADGDILVSGSDDRKVVLWDWQTGKIRLSFHSGHHNNVFQAKFMPYTEDRSIVTCAADG
QIRHAQILAHGKVETKMLARHLGRAHKLAIEPGSPYILYSCGEDGLVQRIDLRTESATER
FTCQPLPPRKNYMSFIHLNAIAMDPRNSNFFAVAGSDEYARLFDIRKCKWDNSSDFGQPV
DFFCPSHLVGDESVGITGLAFSDQSELLVSYNDELIYMFSKNMGLGPDPSPSSPLSNQSD
NGEMGPHLQSGISSLDTCAGTKDDPQAYKGHQNSETVKGVNFFGPKCEYVVSGSDCGRIF
IWNKKGGKLVNVMEADKHVVNCIESHPHTTVLASSGIESDIKIWTPKATEKAVLPVNIQK
VSMPRRVHFFGIRSLINDDDDDDDGGDGEYFLYDGSDGDDDNITDEEVDEEENDDDDDNI
TDEEEEDDDDDDNITDEEDDVDDNITDEEVEEAGEDNIINEEVGDDNITNEDVEEDEDDF
FSDTDDYSNNDDTTCDEVLDDAEEENGSEEEFYDGIDDCDVDDITDEDLDAFSNIEYDEE
HDG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatagggcggccaccggccttgacaccgcggttgtcgatgtctggaaacgagag
atcggtcaactctccactagaaagttctctctccgcctcgccgctcccgaggaccttgtg
cagcgtcttgagatatttcggaagcttgaaaaacatggaggttgtgtcaatacagtcagc
ttcaatgctgatggagacattcttgtatcaggttctgatgacaggaaggttgtactttgg
gactggcaaactgggaaaattagactctcattccattcagggcatcataataatgtcttt
caagccaagttcatgccatacactgaggatcgaagtattgttacctgtgctgctgatgga
cagataagacacgctcagattttagcacatgggaaagtggagacaaaaatgctggcaaga
cacctaggacgggctcacaaattagcaattgaaccaggaagcccttacattttgtacagt
tgtggtgaagatggacttgttcaacgtattgatctgagaacagaatcagccactgaacgt
tttacttgccaacctcttccccccaggaagaattatatgtcttttattcatctaaatgca
attgcaatggatccaagaaactcgaatttctttgctgttgctggatcagatgaatatgct
aggctgtttgatattcgcaagtgtaaatgggacaattcgtcagattttggtcaacctgtt
gacttcttctgtccctcgcatttagttggtgatgagagtgtgggaattactggcttggca
ttctcagatcaaagtgaacttcttgtttcatataatgatgaattgatctatatgttctcg
aaaaatatgggtcttggaccggatccatctccaagttctcccctgtctaaccaaagtgat
aatggtgaaatggggcctcatctccaatcaggtatatcttcattagatacctgtgctggt
acaaaagatgatccccaagcctacaaaggacaccaaaactctgagactgtgaagggtgtt
aatttctttggccctaaatgtgaatatgttgtgagtgggtcagactgtggtcgaattttc
atatggaacaaaaagggtgggaagcttgtcaatgttatggaagcagataaacatgttgta
aattgcatcgaatctcatcctcacaccacagttcttgccagcagtggtattgagagtgac
atcaaaatatggaccccaaaagcaactgagaaggctgtcttgcctgtaaatatccagaag
gtttccatgcctcgccgagtacatttctttggcattagaagtcttattaatgacgatgat
gacgatgatgatggtggtgacggtgaatacttcttatatgatgggagtgatggagatgat
gataacattactgatgaagaggttgacgaagaggagaatgatgatgatgatgataacata
actgatgaagaagaagaagatgatgatgatgatgataacattactgatgaagaggatgat
gttgatgataacattactgatgaagaggtagaggaggctggtgaagataacattattaat
gaagaggtcggtgatgataacattactaatgaagatgtagaggaagatgaagatgatttc
ttcagtgatactgatgattattccaacaacgatgacactacatgtgatgaggtcttggat
gatgctgaggaagagaatggtagtgaagaggagttttatgatggtatcgatgattgcgac
gttgatgatattactgatgaagaccttgatgcttttagtaacatagaatatgatgaagag
catgatgggtga
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integrated database retrieval system
