Ipomoea nil (Japanese morning glory): 109161803
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Entry
109161803 CDS
T04663
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109161803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109161803
03036 Chromosome and associated proteins [BR:
ini03036
]
109161803
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109161803
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109161803
PBAF complex
109161803
GBAF(ncBAF) complex
109161803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
109161803
NCBI-ProteinID:
XP_019165864
LinkDB
All DBs
Position
Un
AA seq
947 aa
AA seq
DB search
MEEKFKDSGTPPAASFSTPQKAAEAPPSDPPTSRRRGGGQKRKASALGSGGTSTPLSTSS
KRQAREKPPPVPFPPIHNGPCTRARQQPSNTAPVASPSNSGVRSEADAALLARVGGAELR
KAEEASIEAKEDFEALEAKIEAEFEAIRSRDANVHVVPSHAGWFSWTKVHSLEEQTMPSF
FNGKSPNRTPEMYMEIRNLIMRKYHADPNTRIELKDLSELSTGVLDARQEVMEFLDYWGL
INYHPFPQPDSATNVDTNVEEAPKEDSLLDKLFRFESEATWTPVVPRANMTTPALTSGLF
PESTLIEELGKSEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCTECFNNGKFDRDMAPS
DFILMEPAEAGGASSGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVEMP
IEDMFLDGDNKIDGILNTDVSVNDDNSASKGGPETTESKDDGNENQPASSSIEALKPDDV
NDSNAEQEYGENIALKALREAFVAIDSFPSPGERLSFAEAGNPVMALATFLVKLVEANVA
TASVRSSLKAVSGEQLAARHCFRLEDPPDDKKSSNSDRAVTESTEPEAQQDEQQNNKLQH
EEPNSVNGKIDSSVEQNNESKQAEENNEKRETMENKKQSEAGESSVKGQGEETLSHCEHS
EKSESRKGTDVKVNDMVVESLHVNGRDEADLQKQETPSTGEGFDTQKSKVEPPSSSTKEC
EDRAIPSHSVDSPKDEDMMPATEKKEPEQSMSMVENKVKSTVGEEKDCKIEKKDASNKND
LDIDKIKHAAVTALSAAAVKAKFLAEQEEDQIRKLAASLIEKQLHKLETKLGFFSEMETT
LVRVREQLDRSKQKLFHERAQIIASRFGISGSSARPMSQPLPANKPGMTFPGTAPRPLTG
MGPAIRPPISRPLMASMPAPSSFMPTAVAGSSVQPSNTDKVSSVGNK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagtttaaagatagcggcactccgccggcggcaagcttctcaaccccgcag
aaggcggcggaggccccaccttcggacccacccacttctcggcgaaggggcggaggccag
aagcggaaagcaagcgccttaggcagcggtggaacttcgactcctctttctacttcctcg
aagcgtcaggctcgcgaaaagccgccgccggtgccctttcctccgatccacaacggtccg
tgcaccagagctcgacagcagcccagcaacaccgctcccgtcgcctcaccctcaaattca
ggcgtccgcagcgaggcggatgcggcgctgctggccagagttggaggggcggagctgcgg
aaggccgaggaagcgtcaattgaagcgaaggaggatttcgaggcgttggaggcaaaaatt
gaagccgagtttgaagcaattaggtctcgagatgctaatgttcatgtggtgccgagtcat
gctggttggttttcttggacaaaagttcattcattggaggagcaaacaatgccatccttc
tttaatgggaagtctccaaacaggactcctgaaatgtacatggagatacgcaatttgatt
atgagaaagtatcacgcagacccaaacactcgtattgaattgaaggatttgtctgagctc
tcgactggtgtgttggatgcaaggcaagaggtgatggagtttctggactactggggtttg
atcaattaccaccctttcccacaacctgattctgctacgaatgttgataccaatgtagag
gaagcaccaaaggaagattctttactggataagctgttccgctttgaatcagaggcaacg
tggacaccagttgttcccagggcaaacatgaccactccagctctgacatctgggctattt
cccgagtctactttgattgaagaattggggaagtctgagggcccttcagttgagtatcat
tgtaactcctgctcgggtgattgctcccgtaaacgttatcattgccagaagcaggcagat
tttgatttatgtacagaatgcttcaacaatgggaagtttgaccgtgatatggccccctca
gatttcattcttatggagcctgctgaggctggtggtgcaagcagtgggaagtggactgat
caggagacactccttctccttgaagcattagaactttacaaagaaaactggaatgagatt
gctgagcatgttgcaacaaagacaaaagctcagtgcatcttgcattttgtcgaaatgcca
attgaggatatgttcttggatggtgataataaaattgatggcattttgaatactgatgtt
tcagtgaatgatgacaattctgcatctaaaggtggtcccgagacaacggagagtaaggat
gatggaaatgagaatcagcctgcatcctcatcaattgaagctttgaagccagatgatgta
aatgattcaaatgctgaacaggaatatggcgagaacattgcactcaaggctcttagggaa
gcatttgtagctattgattcttttccttcacctggggaacgtctttcatttgctgaagct
ggcaatcctgtaatggcattggcaactttcctggtaaaattggtggaagctaatgtagct
actgcctctgtgcgtagctctttgaaagctgtttctggtgagcaattagctgccaggcac
tgttttcgtttagaagatcctcctgatgacaagaaatcatccaactctgatagagctgtt
actgagtcaactgagcctgaagcgcagcaggatgagcagcagaataataaattgcagcat
gaagagcctaattcagttaatggtaaaattgattcttctgttgaacagaataatgagagt
aaacaagcagaagagaataatgaaaaaagagaaaccatggagaacaagaaacagagtgaa
gctggggagagcagtgtaaagggacaaggagaagaaacactttctcattgtgaacattca
gaaaaatccgagtccagaaagggaactgatgtaaaggttaatgacatggttgttgaatca
cttcatgtgaatggaagagatgaagcagatctgcaaaagcaagaaacaccaagtaccggt
gaaggttttgatactcaaaaatcaaaagtggagccaccttccagttccacaaaggagtgt
gaagatagagccataccatctcattctgtggattctccaaaagatgaggatatgatgcct
gccacagaaaagaaagagcctgagcaatccatgtcgatggttgaaaacaaagttaaatca
acagtaggtgaagaaaaagactgcaagattgagaagaaagatgcttcaaataaaaatgat
ctggatattgataagattaagcatgctgcagtcactgctttgtcagctgcagcagtgaag
gcaaagtttcttgcagagcaagaagaagatcaaattcggaagcttgctgcatcattaata
gaaaaacagttacacaagctggagaccaagttgggcttcttcagtgagatggagaccacc
ttagtaagggttagagaacagttggataggtcaaaacagaaacttttccatgagagagca
cagataattgcaagccgatttggcatttctggatcctcagctcgtcccatgtcacaacca
ttacctgccaacaaacctggaatgacttttcctgggacagctcctaggccgttaactggc
atgggccctgcaataaggccaccaatttccaggcccctgatggcatcaatgcctgctccc
agctcatttatgcccacagcagttgcaggtagttcggtacaaccttcaaacacagacaag
gtctcatcggttgggaataagtaa
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