Ipomoea nil (Japanese morning glory): 109161880
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Entry
109161880 CDS
T04663
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109161880
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
General mRNP proteins
109161880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
109161880
NCBI-ProteinID:
XP_019165985
LinkDB
All DBs
Position
Un
AA seq
576 aa
AA seq
DB search
MDFDEYEYLERTVEDPESQNLKGIEQGGEDNIESKETDGKKVSQHKLYDSDDELEYRSKH
SRSVDVSRDHNKKRRSAQYSSSTENIDKNRHRSNREHGDREGDRKDRDRRARERVHGREK
KGERERENLNRSRTYSERHRDRRGRARSPDREMSKDREYKEKNTGSELRERDRQGRRYRE
KKEEVSELEVDPERDQRTVFAYQLHLKADEKDVYDFFCKAGKVRDVRLIMDRITGRSKGV
GYIEFYDVMSVPMAIALSGQPLLGLPVMVKPSEAEKNLVQSSASTTTGEGAAGARKLYVG
NLHFSLKEDQLHQVFEPFGDIELVHMPIDSVTGLCKGFGFVQFARLEDARAATSLDGKLE
IAGQVIKVSAVTDQTGMADVGSNAGDLDGDEAGGLSLDAHSRVLLMRKLDHTGTTMSISG
VVDLLNGSDPPPSASNLGLFPAGSLLIPPLAQAPISAVAELPSSVASIPAVTLSMIIGVP
SECLLLKNMFDPKLEREPNFDLDIKEDVEDECLKFGTLKHIYVDKNSSGFVYLRFENTQA
AMNAQRALHGRWFAGKMITATYMDLQSYEAKFPESR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtatgaatatctggagagaacagtggaagatcctgaatctcaaaat
ttgaaagggatagaacagggaggtgaagacaatattgaatcaaaagagacagatggtaaa
aaggtttcacagcacaaactttatgacagtgacgatgaattggaatatcgatctaaacat
tcaaggtcagtggatgtgtctcgtgatcataacaagaagaggcgctcagctcaatattca
tcttcaacagaaaatattgataagaataggcacagaagtaacagagaacatggggacagg
gagggtgatagaaaggatagagatagaagagcacgtgaacgtgtgcatggaagagagaaa
aagggggaaagggaacgagagaatttgaatcggagcagaacctactcagaaagacacagg
gacagacgtggcagggcaagaagtcccgatagggagatgagtaaggatagggagtataaa
gaaaagaatacaggaagtgaattaagagaaagagatcgacagggaaggagatatagggag
aaaaaggaagaagtgtctgaactagaggttgatcctgaacgagatcaacgaacagttttt
gcatatcagctccatttgaaggcagatgaaaaagatgtctatgattttttctgtaaagct
ggaaaggttagggatgtacgtctaataatggaccgcatcactgggcgctccaagggtgtt
ggttacattgaattttatgatgtcatgtcagtccccatggcaatagcactgtctgggcag
ccacttcttgggctaccagtgatggttaaaccatcagaagctgagaagaaccttgttcag
tccagtgcatccacaactacaggggaaggtgcagcgggtgctagaaaactatatgttggc
aatctgcatttcagtctgaaggaggaccagcttcatcaggtgtttgagccttttggtgat
attgaactagtgcatatgcctattgactctgtgactggactttgcaaaggttttggtttt
gttcaatttgcccgcctagaagatgctagagctgcaacaagtttagatggaaaactggaa
attgcaggtcaagtaattaaggtctcagctgttacagatcaaactggaatggcagatgtt
ggttcaaatgctggtgatttggatggtgatgaagctggtggcttgtctttggacgcacac
tctcgagtacttctcatgaggaaactagatcacactggtaccacaatgagcatcagtggt
gtggttgatcttcttaatggatctgatcctccaccaagtgcatcaaatcttggtctcttt
cctgcaggttctctccttatccctcctcttgcacaggctcctatttctgcagttgcagag
ttgcctagttcagttgcctccattcctgcggttactctctctatgatcattggtgttccc
agtgaatgtttattgcttaagaatatgtttgatccaaagctggagagagaaccaaacttt
gatctggatattaaagaagatgttgaagatgaatgtttgaagtttggtacattaaagcat
atctatgtggacaagaatagttctggctttgtgtacttgcggtttgaaaatactcaagca
gctatgaatgctcaacgtgcactccatgggaggtggtttgctgggaaaatgattactgca
acatatatggatctccagagttatgaagctaagtttcctgagagcagataa
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