Ipomoea nil (Japanese morning glory): 109161891
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Entry
109161891 CDS
T04663
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109161891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109161891
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109161891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
109161891
NCBI-ProteinID:
XP_019166002
LinkDB
All DBs
Position
Un
AA seq
946 aa
AA seq
DB search
MDDEDEALSASEPSDSSVEFISESDNDEDDLDYNCNSGDEDDGHGAQTSNLRCSPEDRKS
ENVAALVRGNLEVRRQSILPRVYSVTDAAVNVRKPFKPPSSNGYSSNNEHLARRLWARKR
FVPWGSNRPALVAITNRVTVLETAHKDVPEEEIYLPPDVEPLLLWQPEGFGEEGCDSKPI
AVEPLLVKYLRPHQREGVQFMFDCVSGLLSTSNINGCILADDMGLGKTLQSITLLYTLLR
QGFDGKAMVRKSIIVTPTSLVSNWEAEIKKWVGERLKLVALCESTREDAISGINNFTSPH
SDLQVLIVSYETFRMHSSKFSNDISCDLLICDEAHRLKNDQTLTNRALASLSCKRRILLS
GTPMQNDLEEFYSMVNFTNPGILGDAAYFRRYYEMPIVCGREPSATEEEKRLGTERSTEL
SAKVNQFILRRTNALLSNHLPPKIIEVVCCKLSPLQVELYNHFIHSKNVKRAITEETKQS
KILAYITALKKLCNHPKLIYDTIKSGSPGTKGFEDCIHLFPHEMFSGRSGSWTGGAGLWV
ELSGKMHVLARLLAQLRQSTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTSISKR
QKLVNCFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ
KKRVYVYRFLSTGTIEEKIYQRQMSKEGLQQVIQQEHADSENQGNLLSTEDLRDLFTFHD
SVRSEIHEKISCNRCQEYEVMLDDTCEAKSTDEQDKSNQEDIGGFAGVAGCSNKLKSSEK
QIGTPKEEDLANWGHHFFPTSVPDTIFPAAAGDEVSFVFTCQVEGKLVPVESSVKQKPKP
QGGQTNISTLKSNLLQRPAALSPRLAVSSMKEPQEAPPQSPFSGVSSKMSTLPAFFKPVQ
KQRTNSIKLTRPLDHTKMKSNRVISSRNQLPQKRTSPDAMGDDDFV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaagatgaggctctttccgcttcagaaccaagcgattcgagtgtcgagttc
atctctgagtcagacaatgacgaggacgacctcgattacaattgtaatagcggcgacgaa
gacgatggccatggagctcaaacatccaatctccgctgcagtccggaagatcggaagtcg
gaaaatgtggccgctttagtcaggggaaaccttgaagtgagaagacagtcaatacttcca
cgagtctattcagtaactgatgcagctgtcaacgtcagaaagccttttaaacctccgagc
tcaaatggttatagtagtaacaatgaacatctggcacgccgtctctgggcacgcaaaagg
tttgtgccatgggggtccaataggccagctttggttgcaatcacgaacagggtaactgtc
cttgagactgctcataaagatgtgcctgaagaagagatatatctgccaccagatgtggaa
ccattgctgttgtggcagcctgaaggatttggggaggaaggctgtgattcaaaacctata
gcagtggaacctttacttgttaagtacctccgaccacatcaaagagaaggtgtccagttc
atgtttgattgtgtttcaggacttttgagcacttccaatattaacggatgcattttagct
gatgatatgggtctggggaagacattgcagtcaatcacactgctttacacacttcttcgt
caaggttttgatggaaaagcaatggttaggaaatcaataattgtgactcctaccagtctt
gtctctaactgggaggctgaaataaagaaatgggttggagaaagacttaaacttgttgct
ctctgtgaaagcactcgagaggatgccatctctggcattaacaattttactagtccacat
agtgatttacaagtattgattgtttcctatgagacatttcgaatgcattcttcaaagttt
agtaatgatatttcgtgtgacctcctcatatgtgatgaggctcacaggttgaaaaatgat
cagacattgactaatcgagccttggcttctttgtcatgcaagcgccgcattttgctgtca
gggactccaatgcaaaatgatctagaggaattttattccatggtaaattttactaaccct
ggaatcttgggagatgctgcatactttcgccgttactatgagatgcccattgtttgtggt
agagaaccctctgctactgaagaagagaagagactaggtactgaacgttctacagagctg
agtgcaaaagttaaccagtttatattgcggaggactaatgcattgttgtcaaatcactta
ccaccaaagataattgaagttgtatgctgcaagttgtcacctttgcaagtggaactttac
aaccattttatacattcaaaaaatgttaaacgggcaattacagaggaaacaaaacaatcg
aaaatcttagcttacattactgccttaaagaagctatgcaatcatccaaagctaatatat
gacacaataaagagtgggagtccagggactaaagggtttgaagattgtatccacttattc
cctcatgaaatgttttccggaaggtctggttcatggactggtggagctgggctttgggtt
gaactatctggaaaaatgcatgtattagctcggttattggctcaactccgtcaatcaact
gatgatagaattgttctagtctcaaactacactcagacgctggacctttttgctcaactc
tgtcgtgaaaggagatatcccttcttgagacttgatggatctacctcaattagcaaaaga
caaaagttggttaattgttttaatgatccatcaaaggatgagtttgcctttctcctgagt
agcaaggcaggaggttgtggcctcaatttgattggtggaaataggctggtgttatttgat
ccggactggaatcctgcaaatgacaaacaggctgcggctagagtatggagggatggccag
aagaagagggtttatgtctatcggtttttgagtacaggaactattgaagagaagatttac
cagcgtcaaatgtcaaaagagggacttcagcaagttattcaacaggaacatgcagattct
gagaaccagggaaatctcctttcaactgaagatctaagggacctgttcacttttcatgat
agcgtgaggtctgaaattcatgaaaagattagctgcaaccgttgccaagaatatgaggtg
atgctagatgacacttgtgaagcaaagtctacagatgaacaagataaatccaaccaagag
gatatcgggggatttgcaggtgttgctggttgctcgaacaagttaaaaagctcagagaag
cagattggaactccaaaggaagaggatttagctaactgggggcatcattttttcccaacg
tcagttcccgatactatttttccggctgcagctggtgatgaggtttcttttgttttcaca
tgccaagttgaggggaagctggtgcctgttgaatcatcggtgaagcaaaaaccaaaaccc
caaggcgggcaaacgaacatttccactttgaaaagcaacctactccagagaccagcggct
ttatctccacgcctagcagtatccagcatgaaggaacctcaagaagcaccaccacaatct
cctttcagtggggtttcctctaagatgagcacattgccagctttttttaagcccgtgcaa
aagcaacggaccaactctatcaagctaacaagacctttggaccatacaaaaatgaaatcc
aacagagtaatctcttcccggaatcagttacctcaaaaaagaacttctccagatgctatg
ggcgacgatgattttgtatag
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