Ipomoea nil (Japanese morning glory): 109162023
Help
Entry
109162023 CDS
T04663
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109162023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109162023
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109162023
Prokaryotic type
Archaeal type
TFB
109162023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
A2L_zn_ribbon
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
109162023
NCBI-ProteinID:
XP_019166210
LinkDB
All DBs
Position
Un
AA seq
311 aa
AA seq
DB search
MADSYCSDCKKNTEVVFDHAAGDTVCSECGLVLESRSIDETSEWRTFADDSGDHDPNRVG
GPVNPLLGDVGLSTVISKGPNSNGDASVARLQNRGGDPDRALVMAFKAIANMADRLSLVA
TIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVKEICSIANGATKKEI
GRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKSEEFDIR
RSPISIAAAIIYMITQLSDSKKPLRDISLATTVAEGTIKNAYKDLYPHATKILPEWYTKD
KDTKNLCSPKA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcctactgttcggactgcaagaaaaacacggaggtggtgttcgaccacgcc
gccggggacaccgtctgctccgagtgcgggctcgtgcttgaatcccgctccatcgacgag
acatctgagtggcgtacgtttgcagatgattctggtgatcacgacccgaaccgtgttgga
ggacccgttaaccccttgctcggcgatgttggcctctccaccgtcatttccaagggccca
aattctaatggcgacgcttctgtggcccgcttgcagaatcggggcggtgatcctgaccga
gcactcgttatggctttcaaagccatagctaacatggctgataggttgagccttgttgct
actataaaggatcgtgcaagtgagatttataaaaggttggaagaccagaagtgtacaagg
ggaagaaatctggatgctttggtggctgcttgcatttatattgcctgtcgacaagaaggc
aaacctcgcacagtaaaagaaatttgctcgattgccaatggagccacaaagaaggaaatt
ggtcgagcaaaagaattcattgtgaaacaattgaaggttgaaatgggggagtcaatggag
atgggaaccatacatgcaggggactatctgcgacgtttttgttctaatcttggtatgagc
aatgaagaagttaaagctgttcaagagactgtccagaagtcagaggagtttgacattagg
agaagccctatatctattgcagctgcaattatatacatgataacacagctttctgattca
aagaaaccattgagagatatttcacttgcaactacagttgcagaggggaccatcaagaat
gcgtacaaggatctatatccccatgctacaaaaattttaccggaatggtataccaaggac
aaggacaccaagaacctttgcagtcccaaggcataa
DBGET
integrated database retrieval system
