Ipomoea nil (Japanese morning glory): 109162093
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Entry
109162093 CDS
T04663
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109162093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109162093
Spliceosome [BR:
ini03041
]
Complex C
Other components
Step II factors
109162093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_SPT8
Beta-prop_EML
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD_LRWD1
eIF2A
Beta-prop_NWD2_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
109162093
NCBI-ProteinID:
XP_019166321
LinkDB
All DBs
Position
Un
AA seq
601 aa
AA seq
DB search
MDLLHSYADDEMDDEGQSEEQPQSSNQNPNSQPLEHSNHSSPDSSPVRMSLPSKSAAPKV
NDTMLALTVAGSAARALSKPLDPTQHTVSFNPTYDQLWAPIYGPAHPYAKDGLAQGLRNH
KLGFVENAAIEPFVFDEQYNTFQKYGYAFDPSANNFVGDMDALKKNDAISVYNIPQHEQK
KRKLEKKKEMMENEQGDGEEDVDAAEVDNPATEVWLRKNRKSPWSGKKEGLQTDLTEEQK
KYAEEYAKKKGEEKGEREKGESLVEKSTFHGKEERDYQGRSWIAPPKDAKPQNDHCYIPK
RLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI
WFCNDGTKFLTASYDKNIKYWDTETGKVISTFSTGKIPYVVRLNPDEDKQNVLLAGMSDK
KIVQWDINTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWEYGIPVVIKYISE
PHMHSMPSISPHPNGNWLAAQSLDNQILIYSARERFQLNKKKRFAGHVVAGYACQVNFSP
DGRFVLSGDGEGRCWFWDWKSCKVFRTLKCHDGVCIGCEWHPLEQSKVATCGWDGLIKYW
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttacactcgtatgctgatgatgaaatggacgatgaagggcaatctgaagaa
caaccacaatcctccaaccaaaaccctaattcccaaccgcttgagcattcaaatcactcc
tctccagattcatctccagtccggatgtcactcccatccaaatctgctgccccaaaagtt
aacgacaccatgttggccctcacggttgctggcagtgcggctcgagctctttcaaaaccc
ctcgacccaactcaacacacagtctcatttaatcccacttatgaccagctctgggcacca
atttatggccctgcacacccttatgcaaaggatggccttgcacagggcctccgcaatcac
aagttggggtttgtggaaaatgctgctattgagccatttgttttcgatgagcagtataat
acgtttcaaaaatatggttatgcatttgacccctcggcaaataactttgttggggatatg
gatgctttgaagaagaatgatgcaatttcagtgtataatataccacagcatgagcagaag
aagaggaagcttgagaaaaagaaggagatgatggagaatgagcaaggagatggtgaggag
gatgttgatgcagcagaagtggataatccggccactgaggtgtggttgaggaagaataga
aagagcccttggtctgggaagaaggagggtttgcaaactgatctaactgaggagcaaaag
aagtatgctgaagagtatgcgaagaagaagggtgaggagaaaggtgaaagagaaaaggga
gagtctttggttgagaagagtacatttcatggtaaggaagagagggattatcagggaagg
tcatggattgcacctcctaaggatgcaaagccacagaatgatcattgttatattccaaag
agattggtgcatacttggagtggccacacaaaaggagtttctgctattaggttcttcccc
aagcatggccatttgattctctctgctgggatggatacaaaagtaaagatatgggatgtt
ttcaattcaggcaagtgtatgaggacttacatggggcactcaaaggcagtgagagatatt
tggttttgcaatgacggaactaaatttttaactgcaagctatgacaaaaatattaagtat
tgggatacagagactggcaaggtgatatctacattttccaccgggaagataccttatgtg
gtgaggcttaatcccgatgaggataaacagaatgtacttctggcgggtatgagcgataag
aagatagtacagtgggatattaacactgggcagattactcaggagtatgatcagcacctc
ggagcagttaatacaatcacatttgtggatgataataggaggtttgtaacttctagtgat
gataaatctctccgtgtttgggaatatggcattcctgttgttattaagtatattagtgaa
ccccatatgcactctatgccatccatttcaccacatccaaatgggaattggcttgcggcc
cagagtttggacaatcaaattcttatctacagcgctagagagaggttccagctgaacaag
aagaagagatttgctgggcatgttgtagctgggtatgcatgtcaggttaatttctcacct
gatgggcggtttgtcctctccggagatggtgaaggtagatgctggttttgggattggaag
agttgcaaagtctttagaaccctcaagtgtcatgatggggtatgcattggttgtgagtgg
catccattggagcaaagtaaagttgctacatgtggctgggatggattgatcaaatactgg
gactag
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integrated database retrieval system
