Ipomoea nil (Japanese morning glory): 109162095
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Entry
109162095 CDS
T04663
Name
(RefSeq) chaperonin CPN60, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109162095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109162095
03110 Chaperones and folding catalysts [BR:
ini03110
]
109162095
03029 Mitochondrial biogenesis [BR:
ini03029
]
109162095
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ini04147
]
109162095
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109162095
Messenger RNA biogenesis [BR:
ini03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109162095
Chaperones and folding catalysts [BR:
ini03110
]
Heat shock proteins
HSP60 / Chaperonin
109162095
Mitochondrial biogenesis [BR:
ini03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109162095
Exosome [BR:
ini04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109162095
Exosomal proteins of other body fluids (saliva and urine)
109162095
Exosomal proteins of breast cancer cells
109162095
Exosomal proteins of colorectal cancer cells
109162095
Exosomal proteins of bladder cancer cells
109162095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109162095
NCBI-ProteinID:
XP_019166327
LinkDB
All DBs
Position
Un
AA seq
579 aa
AA seq
DB search
MHRFLSNIASKARVAKSSSQQVGSRLGWSRNYAAKDIRFGVEARALMLQGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSVEFNNKVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLLNELEVVEGMKLDRGYISPYFITNPK
NQKCELDDPLILIHEKKISSINAIVKILELALKKQRSLLIVAEDVDSDALATLILNKLRV
GVKVCAIKAPGFGENRKANLQDLATLTGGQVITEELGLNIENVDMEMLGTCKKVTVSKDD
TVVLDGAGEKTSIEERCEQIRLAVELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNADLGYDAAKGEYVDMVKAGIIDPVKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKETPAGMGGGMGGMGGMDY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttcttatcgaacattgcctccaaagccagggttgcgaaaagcagctcccag
caggttggtagtaggttaggctggagcagaaattatgctgctaaggatattagatttgga
gtggaggctcgggccttgatgcttcagggtgtagaagaacttgctgatgcagttaaagtt
actatgggtcccaagggacgtaatgttgttattgaacaaagttggggtgcccctaaagta
acaaaagatggtgtcacagttgcaaaaagtgttgaattcaacaacaaagtgaagaatgtt
ggtgcgagcctggtaaagcaggttgctaatgctactaatgatgttgctggtgatggtacc
acttgtgcaactgtcctcacacgggctatatttgctgaaggctgtaagtcagttgcagct
ggcatgaatgcaatggatcttagacgtggtatcaccatggctgttgattctgtggtcaca
aacctgaagagcagagcacggatgataagtacatcagaagaaattgcacaggttggtaca
atttccgcaaatggggaaagagaaattggtgagttgattgcaaaggctatggagaaagtt
ggcaaggaaggagtcatcacaattcaagatggaaagacattattgaatgagttagaagtt
gttgaggggatgaagctggataggggctacatctccccatattttattaccaatccaaag
aaccaaaaatgtgagttggatgaccctcttattctaatacacgagaagaaaatctcaagc
ataaatgctattgtaaaaatcttagagttggctttgaagaaacaaagatctctcttgatt
gtagctgaagatgtggacagtgatgcccttgcaactcttattctaaacaaacttcgtgtt
ggagtcaaggtttgtgccataaaagctcctggcttcggtgagaacaggaaggccaatctt
caagatcttgctactttaactggaggccaagtcataacagaagagcttggattaaatatt
gaaaatgtggatatggaaatgctagggacatgcaaaaaggtcacagtatcaaaggatgat
actgttgttcttgatggtgcgggagagaagacgtctattgaggaaagatgtgaacagatc
cgattggctgttgaattaagcacatctgattatgacaaggagaagctacaagaaagacta
gctaagctctctggtggagtggctgtattaaagattggaggggccagtgaagctgaggtt
ggtgagaagaaagatagagtcactgatgcactaaatgccaccaaagcagctgttgaggaa
ggaattgtacctggtggcggtgttgctcttctctatgcctcaaaagaattggagaagctc
ccaacagctaactttgatcagaagattggtgttcaaattattcagaatgccctgaagacg
ccagtgcacacaatagcctctaatgctggagtagagggagctgttgtcgttggtaaactg
cttgagcaagataacgctgatcttggatatgatgcggcgaaaggtgagtatgttgatatg
gttaaggcaggtattattgatccggtgaaagtcataagaacagccttggttgatgctgct
agtgtatcttctctcttgacgacaacggaggcagtggtcgttgagcttccaaaggacgag
aaggaaactccagctggtatgggcggtggcatgggcggaatgggtggtatggactattga
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