Ipomoea nil (Japanese morning glory): 109162629
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Entry
109162629 CDS
T04663
Name
(RefSeq) SNW/SKI-interacting protein-like
KO
K06063
SNW domain-containing protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109162629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109162629
Spliceosome [BR:
ini03041
]
Complex B
Other components
Prp19-related factors
109162629
Complex C
109162629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
109162629
NCBI-ProteinID:
XP_019166864
LinkDB
All DBs
Position
Un
AA seq
597 aa
AA seq
DB search
MASLRDFLPPVKSSGTAHYDHSNDPWFKNRYSADEVEKTAAIKANPVLPYLKRAGFRPSK
LEDFGDGGAFPEIHYAQYPLDMGRKKDWKPGSRTLPVTVDEHGDVRYDAIVRQNENSKKI
VYSQHKDLVPKVVMDEEDEEMDEDEKEKIIEDTTLATKSALERIVNVRLSAAQPKNVPAQ
SSDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVMH
SPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEAL
YVAEQKAREAVAMRSKVQKEMMMKEKEKKEMELRELARKARSERTGIAPPASAPTVSERG
ALNDGMNVDFDRVRDVPKENREERDEKLQRDKIREERRRERERERRLEAKDAAMGKKSKI
TRDRDRDVSEKMALGMASTGAARGEVMYDQRLFNQEKGMESGFATDDAYNIYDKGLFTTQ
PTLSTLYRPKKDGDAEMYGGADEQLDKIMKTDRFKPDRAFAGTSDRGAPRDRAVEFEKEA
EEADPFGLDQFLTEVKKGKKALDKVGSGGTMKASAGSTRDGFEGGSSRTRLHFERGR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctgagggattttctcccaccagtgaagtcaagtggtactgcacattatgac
cactcaaatgacccatggtttaagaacaggtatagtgcagatgaggtggagaaaactgcg
gcaataaaggcgaatccagtgctcccttatttgaaaagagctggatttcggccatctaag
cttgaggatttcggggatggaggagcgtttccggaaattcattatgcacagtatcctctt
gatatggggagaaagaaggactggaaacccgggagcaggacattgcctgttactgtcgat
gagcatggtgatgtgaggtatgatgcgattgtgagacagaatgagaattcgaagaaaatt
gtgtactcgcagcataaggatcttgttcccaaggttgtgatggatgaagaagatgaagag
atggatgaggatgagaaggagaagataattgaggacactactttggcgacaaaatcagca
cttgagaggattgtgaatgtacggttaagtgctgcacagcccaaaaatgttccggctcag
tcttcagattcgaagtttattaagtacaagccatcacagcagtccgcggcttttaattcg
ggtgctaaagagaggattattcgaatggtggagatgcccgtggacccattggagccaccc
aagtttaaacataagagagttcctaaggcttctggttctccacctgtgcccgttatgcac
tctccacctcgtcctgtgactgtgaaggaccaacaggattggaagataccgccttgtatt
tctaattggaagaatccgaaagggtatacgatcccacttgataagcgcctggctgcagat
ggtagggggcttcaagaggtccaaatcaatgacaatttcgcaaaactgtcagaggctttg
tatgttgcagaacagaaggctagagaagcagttgcaatgcggtctaaggtgcaaaaggag
atgatgatgaaagagaaagaaaagaaggagatggagcttcgtgagctggcccggaaggca
agatctgagcgaactggcattgcacctccagcatcagcccctacggtttctgaaaggggg
gccttgaatgatggtatgaatgtggactttgaccgtgtaagagatgtaccaaaggagaat
agggaggaaagagatgaaaaattacaaagagacaaaattcgtgaagagaggcggcgagag
agggaaagggagagaagattggaggctaaagatgctgcaatgggcaagaagagtaagatc
acgagggatagggaccgtgacgttagtgaaaaaatggccctcgggatggcctctacgggt
gccgccaggggagaggtcatgtatgatcaaagattatttaaccaggagaaggggatggaa
tctggatttgcaaccgatgatgcatataacatttacgacaagggtctctttactactcaa
cctaccctttctacactttataggccaaagaaagatggtgatgctgagatgtatggaggc
gcagatgagcaactcgataagattatgaagacagatcgatttaaacccgacagagcattt
gcgggaacatctgataggggtgccccaagagatagagctgtagagttcgaaaaggaggct
gaggaggcagatccatttggtttggatcagttcttgacagaggtcaagaagggtaagaaa
gccttggacaaagtaggcagtggaggtaccatgaaggccagtgctgggtccactagggat
ggatttgaaggaggatctagcagaacaagacttcactttgagagggggagataa
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