Ipomoea nil (Japanese morning glory): 109162683
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Entry
109162683 CDS
T04663
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109162683
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109162683
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109162683
NCBI-ProteinID:
XP_019166912
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All DBs
Position
Un
AA seq
436 aa
AA seq
DB search
MEGNKQKHQMMFLLVVAITALTTQANIGHFDEVWQERAAAAQKAARNAYNPNPHNVTNHL
NENVHMVVNSTRRGLNHKPKYKGPCMATNPIDKCWRCNKNWAKNRMKLADCSLGFGRNAQ
GGKGGKIYVVTDPSDRDLLKPKPGTLRHAVIQPGPLWIIFGHSMVIRLSQELILTSRKTI
DGRGQEVHITNGAGLTLQFINHVIIHSLHIRDIKPGKGGMIRDSVKHYGLRTKSDGDGIS
IFGATNIWIDHVSMSNCVDGIIDAVMASTAITISNCHFTRHNEVLLFGASGINKQDKVMQ
ITLAFNHFGHGLVQRMPRVRYGFVHAVNNDYTHWLMYAIGGSHKPTILSQGNRFIAPPNG
YAKEVTKREYAQESEWKNWAWKSDHDLMMNGAFFRQSGNPKHVFPHDNSIKPMPGTFVGK
MTRFAGHLHCIVGKPC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaataagcaaaaacatcaaatgatgttcttgttagtggtcgctattactgct
ctcacgactcaagctaacattgggcatttcgatgaggtgtggcaggagcgagccgccgcg
gcgcagaaggccgctcgcaacgcctataaccctaatccccacaacgtcacaaatcattta
aacgagaatgtacacatggtggtgaatagcacgaggaggggcttaaatcacaaacccaag
tacaaaggtccatgcatggccacaaaccccattgataaatgctggagatgcaacaaaaac
tgggccaagaaccggatgaagttggcggactgctctctgggcttcggccgcaacgcccaa
ggaggtaaaggaggcaagatttacgtcgtcaccgatccttctgacagagatctcctcaaa
cctaagcccggaaccctccgccacgccgtcatccagcccggccccctctggatcatcttc
ggccactccatggtgattaggttgtcgcaggaactgatcttgaccagtagaaagaccatc
gacggccgcggccaggaagtccacatcaccaacggcgccggcctcactctccagttcatc
aaccacgtcatcatccatagccttcacattcgcgacattaagcccggtaagggcggcatg
atcagagactctgtcaagcactacgggctccgaactaagagcgacggcgatgggatttcc
atcttcggggctaccaacatttggatcgatcatgtttccatgtctaattgtgtggatggg
attatcgatgccgttatggcttctacggctatcaccatatccaattgccatttcactagg
cataatgaggttttgttgtttggggcaagtgggatcaataaacaggacaaagtgatgcag
attacgcttgcgtttaatcactttgggcatggattggtgcagagaatgccgagagtgaga
tatggcttcgtccacgccgtcaacaatgattatacacactggcttatgtatgccattggt
ggcagccacaaaccaactatcctcagccaaggcaaccgcttcattgctcctcccaacggt
tacgccaaagaggtgacaaaaagggagtatgcacaagagagtgagtggaaaaactgggcg
tggaaatcagaccatgacctgatgatgaatggtgcatttttccgtcaatctggaaatccc
aagcatgtatttccccacgataattccatcaagcctatgccgggaacatttgtgggcaag
atgacacgatttgctggccatttacattgcatcgtggggaaaccttgttga
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