Ipomoea nil (Japanese morning glory): 109162956
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Entry
109162956 CDS
T04663
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109162956
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109162956
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109162956
NCBI-ProteinID:
XP_019167209
LinkDB
All DBs
Position
Un
AA seq
442 aa
AA seq
DB search
MRGLMKSHQISIFVFFLLLVFAATLQADIAEYDAYLKKKADEALQSSLQAYYHNPEEVTD
NFNEEVGDTIMNWTNTTRRHLRGSHCKATNSIDRCWRCDQDWAKHRKRLAFCARGFGSGT
TGGLKGRFYVVTDSSDKDMENPKPGTLRHAVIQEEPLWIIFKKSMVITLKQELIINHDKT
IDGRGVSVHIAYGAGLTIQFVRNVIIHGIKIHHILPKMGGMIRDSVNHIGLRTMSDGDGI
SIFGSNHVWLDHLTMSRCSDGLIDAIMASTAITISNCKFNHHNHVLLLGASDLFSEDAIM
QVTVAFNRFGKGLIQRMPRCRWGFFHIVNNDYTKWEMYAIGGSSRPTIVSQGNRFKASSN
PFTKQVTKREIVSKNVWKNWQWRSEGDLFLNGAYFVESGEELHHYNNTRFNNTNRIRHRP
ASYVGRLTRTSGALKCKVGRFC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagggggttgatgaagagccatcagatttcaattttcgtgttctttctcctccttgtg
tttgctgctacattgcaggcggatatcgcagaatatgacgcctatttgaagaagaaagcc
gatgaagcattgcaatcgtccctgcaggcttactaccacaatcccgaggaagtcacggat
aatttcaatgaggaagttggagatacgataatgaattggacgaatactacgagaaggcac
cttagaggaagccattgcaaggcaacaaactccatagacagatgctggaggtgtgatcaa
gactgggcaaagcacaggaagaggctagcgttctgtgcccgtggcttcgggagtggcaca
actgggggactaaaagggcgattttacgtggtaaccgattcatcggataaagacatggag
aatcccaagccaggaactctccggcatgcagtgattcaagaagagccactttggatcatc
ttcaagaaatccatggtgattactcttaagcaggagctgattataaaccatgacaaaacc
attgatgggcggggggtgtctgtgcacattgcttatggtgctgggttgaccatacagttt
gtaaggaatgtgatcatccatggcatcaagatccaccacattttgcccaaaatgggtggc
atgatcagggactctgtgaaccatattgggctgaggacgatgagcgatggagatggtatc
tccatcttcgggtccaaccatgtctggcttgaccatctcaccatgtccagatgcagcgat
ggcctcatcgacgcaatcatggcttccactgccatcaccatctcaaactgcaaattcaat
caccacaaccacgtgctgctgttgggtgcgagcgacttgttttcagaagacgccatcatg
caagtgacggtggcattcaatcggtttgggaagggtttgattcagaggatgccaaggtgc
cgatgggggttcttccatatcgtcaacaacgactacactaagtgggaaatgtatgccatt
ggaggtagctccagacccaccattgtgagccagggcaacaggttcaaggcctccagcaac
ccattcactaagcaggtgaccaagagggaaatcgtttcaaaaaatgtgtggaagaactgg
caatggagatcagagggggatttgttcttgaatggagcctactttgtagagtccggggaa
gagctccaccactacaacaacactcgtttcaacaacaccaataggatcagacacaggccc
gcttcatatgttggacgcctcactcgaacttctggcgcactaaagtgcaaggtcggcaga
ttttgctaa
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