Ipomoea nil (Japanese morning glory): 109162957
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Entry
109162957 CDS
T04663
Name
(RefSeq) probable CCR4-associated factor 1 homolog 10
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109162957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109162957
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109162957
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109162957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109162957
NCBI-ProteinID:
XP_019167211
LinkDB
All DBs
Position
Un
AA seq
159 aa
AA seq
DB search
MVAEKDSDSVEIREVWDYNLEQEFALIREVVDEYSYIAMDTEFPGVVIRPVGNFNNSCDY
HYQTLKDNVDMLKLIQLGLTFSDEEGNLPNGGGTHTQNIWQFNFREFNPNKGCLANDSIE
LLRHSGIDFQKSIKKGIDARRFGELLMPSGVVLNDNVLG
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggtagctgagaaggattcggattcggttgagattcgggaagtgtgggattataatctg
gagcaggagtttgccctgatccgggaagttgttgatgagtattcgtacatcgccatggac
acggagttccccggcgtggttatccgcccggtgggcaacttcaataacagctgcgactac
cattaccagacgctcaaagacaacgtggacatgctgaagctcatccagctagggctcacc
ttctccgatgaggaagggaacctgcccaacggcggggggacccacacccaaaacatttgg
cagttcaacttccgagagttcaaccccaacaaaggatgtctcgccaacgattccatagag
ctcttgcgccacagtggtatcgatttccagaagagcatcaagaaagggatcgacgccagg
cgatttggcgagctgctgatgccatctggtgtggtgttgaacgataatgtgcttgggtaa
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integrated database retrieval system
