KEGG   Ipomoea nil (Japanese morning glory): 109162972
Entry
109162972         CDS       T04663                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109162972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109162972
Spliceosome [BR:ini03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109162972
 Complex B
    109162972
 Complex C
   U2 SnRNP specific factors
    109162972
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_PARP14_3 DUF4523 xRRM DUF6445 RRM_YTH1
Other DBs
NCBI-GeneID: 109162972
NCBI-ProteinID: XP_019167228
LinkDB
Position
Un
AA seq 231 aa
MMLTGDIPPNQTIYIKNLSEKVKKEELKRSLYCLFSQYGRILDIVALKTAKLRGQAWVVF
SEVTAASNAVRQMQNFPFYDKPMRIQYAKAKSDCIAKAEGTYDKKKKQDEKAERRKRTEE
AQHSGTANGQRADANGGPAVAARQGKPGAQETTEPNNILFIQNLPHETTSMMLEVLFNQY
PGFREVRMIEAKPGIAFVEFEDDVQSSVAMQALQGFKITPQNPMAISYAKK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgatgctcaccggagacataccgccgaatcaaacaatctacattaagaacttaagcgag
aaggtcaagaaagaagagttgaagaggtctctttattgtttattctcacagtatggtagg
atattggacattgtagccttgaagacagcgaagctcagggggcaggcatgggttgtcttc
agtgaagttacagctgcaagtaatgctgtgagacagatgcagaatttcccgttttatgat
aaaccaatgcggatacaatatgcaaaagcaaagtccgattgcattgctaaagctgaaggt
acctatgacaagaagaagaagcaggatgaaaaagctgaaaggaggaaacgcactgaagaa
gcacagcattctggcactgctaatggccaaagagctgatgcaaatggaggcccagctgtt
gctgcccgccaagggaagccaggagcacaagaaacgacagaaccaaataacatactcttc
atacagaacctgccccacgagactacgagcatgatgctggaagtgctcttcaatcagtac
cccggttttagggaagttcgaatgatagaagcaaagccaggcatcgcgtttgtggaattc
gaagatgacgtccagtcctcagttgccatgcaggcccttcaaggcttcaaaattacaccc
cagaatcctatggctatctcctatgccaagaaatag

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