Ipomoea nil (Japanese morning glory): 109163192
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Entry
109163192 CDS
T04663
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109163192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109163192
03400 DNA repair and recombination proteins [BR:
ini03400
]
109163192
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109163192
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109163192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
T2SSL
Motif
Other DBs
NCBI-GeneID:
109163192
NCBI-ProteinID:
XP_019167494
LinkDB
All DBs
Position
Un
AA seq
966 aa
AA seq
DB search
MIMAKVFKGANVFMSRNLVPPEHFDALHDALKLNGAQVFLCCDPSRNAPDDYHIISSIDH
EKFEDLRSKKCNLIGPQCVLFCAKEQRPLPNQGFTCCLAMDGVKILASGFEADEKVEIKK
LVEAMGGVLQAKASMDVNFVIVKNVLAAKYRWAVNVLKKPIVSINWLHQCWKEHRFVPHE
SFRVHPFSGLTISVTRIPADERKEVEKIVLQNGGKYSPELTKACTHLICPAPVGDKYNVA
KSWGHIRIVTKRWLDQSVARGACLNEESYRIQGSSASMNSVRIKNRHSLENVIESVQSMS
TATVSNSHAVDSDMGATDCQNTSSFSGAPFFSKGDESDAPTEQQKNNTNFDGCVAGDSQT
DDNDLYLSDCRLLILGFSAPEMRKLVNMVRKGGGSRYMSFSDKLTHIIVGSPSEIETKEI
RNLAALGVIHVVKPDWLADCISEKKEVPVLRKHIANDLLFPRASVAVVKQGKSNENVQHY
KNFGSGNLLEKRKEVENIKNKGASQIEKGSLQPQFCTLNSKEERKMQASSSTAAEDKKSS
IVFKGKRFCFSSSFPANQRADIIGWVNQGGGELVEDQIQRDVHFTIECHGAVPSQTDAAR
VTYVSSHWIKSCLEDGHLLDVGSHIIYSPLPCQVPFPAFKGFRLCVSQYDVKERQLLRNL
CVVLGAKFVEKLTTRVTHLLCKFTSGPKYDAACKLRIQPVTCEWIYECIKQNTIVAPDPF
YPKEVTTEDREAGICTTSQFPTQAVQMISEDNVSQLQNQSKEINSVNSEAFTARSSAREE
MKYLPSSSKKARLLADEKLKCPLSSLSNQSDAISGANPPNNRRMESTKDCAIMTDVANLI
EDCLEQTSKNHNPKSPSRNGCDKDLFTSECTILGQDHAEPQSALRLSEHWTNRYFLPELF
TVMNWTISMSSTFTLWFSLFTSDLIKRTTLNLFMKMYLLLPFTMDLAIPKQSLRWLVMRK
ICPVCK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcgaaggtgttcaagggagccaacgtgttcatgtcgcggaacctggttccg
ccggagcacttcgacgctcttcacgacgcgctcaagctcaacggagctcaggtcttcctc
tgctgtgacccctcccgcaacgcgcccgacgactaccacatcatttcctctatcgatcat
gagaaattcgaggatctccgctccaaaaaatgcaatttgattggtcctcagtgtgtgctt
ttttgtgccaaggaacagagaccactgcccaatcaaggttttacatgttgccttgcaatg
gacggagtcaaaatactggcatctggttttgaagcggatgaaaaggttgaaataaaaaag
ctagtagaagcaatgggaggagttttgcaagcaaaagcatcaatggatgtaaactttgtc
attgtgaagaatgttttggctgcaaaataccgatgggcagtaaatgtactgaagaaacca
attgttagtattaattggctgcatcaatgttggaaggagcatcgctttgttcctcatgag
tcattcagggtccaccctttttctgggctcaccatcagtgtcaccagaattcctgcagat
gagaggaaggaggtggaaaagattgtcttacaaaatggaggcaaatattctcccgagctg
accaaagcctgcacacatttaatttgccctgctcctgtaggtgataaatacaatgttgcc
aagagttggggtcacatacgcatagttaccaagaggtggcttgaccaatctgttgccaga
ggagcttgccttaatgaggagtcctatcgtattcagggcagttctgcatctatgaattca
gtaagaataaaaaaccgacacagcttggagaatgttattgagagtgttcaaagtatgtcc
actgcaactgtatcgaactctcatgctgtggattcagatatgggggccactgattgtcag
aacacgtcttcattttccggtgctcctttcttttccaaaggggatgaaagtgatgcaccc
actgaacagcaaaaaaataatactaattttgatggatgtgttgctggtgactctcaaaca
gatgataatgatttatacttgtcagattgtagacttctaattcttggttttagtgcacct
gaaatgcgtaaacttgtcaacatggttcgtaaaggtggtggttctcgttacatgtcattc
agtgacaagttgacacacataatagttggatctccatctgagattgaaaccaaagaaata
agaaatcttgcagctttgggtgtaattcatgttgtaaaaccagattggcttgcagattgc
attagtgaaaagaaagaagttcctgttcttcggaagcatattgcaaatgatttacttttt
cccagagcgagcgtcgctgttgtgaagcaaggaaaatcaaatgaaaatgttcagcactac
aagaattttggatctggaaatttactggagaagagaaaagaagtagaaaacataaaaaac
aaaggagcttctcagatagaaaaaggatcactccaaccgcagttctgtactttgaattct
aaagaagagaggaagatgcaggcaagttccagcacagcagctgaggataaaaagtcatct
attgtatttaagggaaagcgattttgcttttcaagctccttccctgctaatcagagagct
gatattatagggtgggtgaatcaagggggaggagagttggtggaagatcagattcaaaga
gatgtgcatttcactattgaatgtcatggtgcggtgccctctcagacagatgctgctagg
gttacgtatgtgtcaagtcactggattaaatcttgtttagaggatggacacttgctggat
gttggcagtcacatcatctattctccacttccttgtcaagtacctttccctgcatttaag
ggctttcgtttgtgtgtttcacagtatgatgtaaaagaaaggcaactgctaagaaattta
tgtgttgtccttggagctaagtttgttgagaaattgactactagggtcacacatttatta
tgtaaattcaccagtggcccaaaatatgatgctgcttgtaagttacgtatccaaccagta
acttgtgagtggatttacgagtgcattaagcagaacacaattgttgctccagatccattc
tatccaaaagaagtaactactgaagatcgagaagctggaatttgcacaacgagccagttt
cctacacaagctgttcagatgatatctgaggataatgtttctcagcttcaaaatcagtct
aaagaaatcaacagtgtgaatagtgaagctttcactgccagaagttctgcaagggaagaa
atgaagtatttgcccagtagtagcaagaaggcaaggctcttagcagatgaaaaactaaag
tgtccgctatcatctctatccaatcaaagtgatgctatatctggggcaaaccctccaaat
aacaggaggatggaaagcaccaaagattgtgctataatgaccgatgtagctaaccttatt
gaggattgtttagagcaaacaagcaagaatcacaatccaaagtctccatcaagaaatggc
tgtgataaagacctcttcacttctgagtgtacaattcttggtcaagatcatgcagaaccg
cagtctgctctgagattgtctgagcactggacaaacaggtattttctccctgaacttttt
acggtgatgaactggacaatctctatgagttcaacatttacattatggttttcacttttc
acctcagatttgataaaaaggacgactctcaacctcttcatgaagatgtacctgctactg
ccttttacgatggatttagcgatccccaaacagagtctcaggtggttagttatgcgcaag
atttgtccggtatgcaaatga
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