KEGG   Ipomoea nil (Japanese morning glory): 109163206
Entry
109163206         CDS       T04663                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03420  Nucleotide excision repair
ini04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109163206
  09124 Replication and repair
   03420 Nucleotide excision repair
    109163206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ini03051]
    109163206
   03400 DNA repair and recombination proteins [BR:ini03400]
    109163206
Proteasome [BR:ini03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    109163206
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      109163206
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 CUE Rad60-SLD TECR_N UBA_3 UBA_RAD5A
Other DBs
NCBI-GeneID: 109163206
NCBI-ProteinID: XP_019167513
LinkDB
Position
Un
AA seq 370 aa
MKLTVKTLKGSHFDIRVQPSDTIMAVKKNIEDAQGKDSYPCGQQLLIHNGKVLKDESTLA
ENNVSEDGFLVVMLSKSKTVGSSGTSSAQPSATGAPTSNPTTPAEVPSSAPAPKSVASAS
DAATASVPSDTYSQAASNLVAGNNLEQTIQQIMDMGGGNWDKETVTRALRAAYNNPERAI
DYLYSGIPETAEVALPVAQSGGPAAAQGAVNAIPVSGGPNSSPLNLFPQEQVAGAAGAGL
GSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPHLLRTIQEHHQEFLQLINEPVD
GSEGDIFDDQPEQDIMPHTVSVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANY
LLEHSGDYED
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaagcttaccgtcaaaactctcaaaggcagtcactttgatattagggttcaaccctcc
gacaccattatggctgtaaagaaaaacattgaagatgcacagggaaaggacagctatcca
tgtgggcagcagttacttattcataatggtaaagtattgaaagatgagagcacgttggct
gaaaacaatgtttctgaagatggatttcttgttgtcatgcttagcaagagcaaaactgta
ggatcaagtgggacatcatctgcacagccctcagcaactggtgctccaacttctaatcct
actacaccagctgaagttccttcttcagcaccggcccctaagagtgtagcatctgcttct
gatgctgcaacggctagtgttccctctgatacttatagtcaagctgcttcgaatttagta
gctggtaataatcttgagcagaccatacaacaaattatggatatgggtggtggaaattgg
gacaaggaaacggttacacgtgcacttcgtgctgcttataacaacccagaaagagctatt
gactatttatattcagggattccagaaacagctgaagttgctctacccgtggctcagagt
ggtgggcctgctgcagctcaaggtgcagttaatgctatccctgtttcgggaggaccgaat
tcatctcccttgaatttgttccctcaggagcaggttgctggggctgctggtgctggtctt
ggatcccttgattttctcagaaacaaccaacagttccaagctttgcgttcaatggttcaa
gctaacccacaaatcctgcagcctatgcttcaggagctaggaaagcaaaacccccatctt
ttaagaacaatacaagagcaccatcaagagttcctccagttgatcaatgagcctgttgat
ggttctgagggggacatatttgatgatcagcccgagcaagatattatgccccatacagtc
agtgttacgccagcagagcaggaggcaattgagaggcttgaggccatgggtttcgataga
gcactagtgatcgaggcgtttttagcgtgcgaccgcaatgaggaattggcagcaaactat
ctgctggagcattcaggcgattacgaggactga

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