Ipomoea nil (Japanese morning glory): 109163206
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Entry
109163206 CDS
T04663
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03420
Nucleotide excision repair
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109163206
09124 Replication and repair
03420 Nucleotide excision repair
109163206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ini03051
]
109163206
03400 DNA repair and recombination proteins [BR:
ini03400
]
109163206
Proteasome [BR:
ini03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109163206
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109163206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
TECR_N
UBA_3
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
109163206
NCBI-ProteinID:
XP_019167513
LinkDB
All DBs
Position
Un
AA seq
370 aa
AA seq
DB search
MKLTVKTLKGSHFDIRVQPSDTIMAVKKNIEDAQGKDSYPCGQQLLIHNGKVLKDESTLA
ENNVSEDGFLVVMLSKSKTVGSSGTSSAQPSATGAPTSNPTTPAEVPSSAPAPKSVASAS
DAATASVPSDTYSQAASNLVAGNNLEQTIQQIMDMGGGNWDKETVTRALRAAYNNPERAI
DYLYSGIPETAEVALPVAQSGGPAAAQGAVNAIPVSGGPNSSPLNLFPQEQVAGAAGAGL
GSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPHLLRTIQEHHQEFLQLINEPVD
GSEGDIFDDQPEQDIMPHTVSVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANY
LLEHSGDYED
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccgtcaaaactctcaaaggcagtcactttgatattagggttcaaccctcc
gacaccattatggctgtaaagaaaaacattgaagatgcacagggaaaggacagctatcca
tgtgggcagcagttacttattcataatggtaaagtattgaaagatgagagcacgttggct
gaaaacaatgtttctgaagatggatttcttgttgtcatgcttagcaagagcaaaactgta
ggatcaagtgggacatcatctgcacagccctcagcaactggtgctccaacttctaatcct
actacaccagctgaagttccttcttcagcaccggcccctaagagtgtagcatctgcttct
gatgctgcaacggctagtgttccctctgatacttatagtcaagctgcttcgaatttagta
gctggtaataatcttgagcagaccatacaacaaattatggatatgggtggtggaaattgg
gacaaggaaacggttacacgtgcacttcgtgctgcttataacaacccagaaagagctatt
gactatttatattcagggattccagaaacagctgaagttgctctacccgtggctcagagt
ggtgggcctgctgcagctcaaggtgcagttaatgctatccctgtttcgggaggaccgaat
tcatctcccttgaatttgttccctcaggagcaggttgctggggctgctggtgctggtctt
ggatcccttgattttctcagaaacaaccaacagttccaagctttgcgttcaatggttcaa
gctaacccacaaatcctgcagcctatgcttcaggagctaggaaagcaaaacccccatctt
ttaagaacaatacaagagcaccatcaagagttcctccagttgatcaatgagcctgttgat
ggttctgagggggacatatttgatgatcagcccgagcaagatattatgccccatacagtc
agtgttacgccagcagagcaggaggcaattgagaggcttgaggccatgggtttcgataga
gcactagtgatcgaggcgtttttagcgtgcgaccgcaatgaggaattggcagcaaactat
ctgctggagcattcaggcgattacgaggactga
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integrated database retrieval system