Ipomoea nil (Japanese morning glory): 109163459
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Entry
109163459 CDS
T04663
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109163459
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109163459
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109163459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4_4
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
zf-RING_5
Nrf1_activ_bdg
DUF3287
zf-RING_11
Swi5
zf-RING_16
DUF2884
Motif
Other DBs
NCBI-GeneID:
109163459
NCBI-ProteinID:
XP_019167749
LinkDB
All DBs
Position
Un
AA seq
638 aa
AA seq
DB search
MPRRLVGFDPAFIAGFDDIYEEDERFLYHDEEDDDDEEEEEEEEEDSEEETDGGEEEEQD
TSRLMPRRVLQGDGGATTSSQEAVVNVQGSESIMETMAEDGGAQGAKPVEKLAVINSEVV
DGSGGGGEEWSRSDIDGLFCPICMEAWSNGGNHQICCLPCGHIYGISCIKKWLQQRKSSG
KCPQCNKKCTMKDVRLLYASQLHVVDEELQKKIQSLEAQCASLEKKCSDLCKKEVEWERK
EANLQLQVRELKERRTNSDYLPRDKQSRPSELYTSGHSCNYAWRGYFNGFSLKEEMRIEG
ARFFDVDVSGQILIIARRLPGMGGIHVLTKMSLLSHHEKEDIQLPLNIKAIKDLHISPYD
RLVLVASLGKKLSVLSTESNNTVLTYDLPAAAWSCSWDVNNSYYVYAGLQNGMVMEFDRR
QTVKPVESMNGLAAKPIHTVHSVLSNPVTGSGLRRSILTASSVGLCHWNFGCSEERPHLI
PESEDQGVCISLAYASRTNDIVASFRPKVEMPGDFAATQTMLSPSASPMEQAVQGSHVVY
RVAGSGYHKVGSSCANVSGIRFPKSTIIERDGTKPIFAYGDEASSELVLQELPSLKDVMR
LQAPRNPIRDVKYTHALNSGLLSCLRQDTMQLFTVNGS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaaggttggtcggtttcgatccggcctttatagccggattcgacgacatctac
gaggaagatgagcgttttctctatcacgacgaagaagacgatgatgatgaagaagaagaa
gaggaagaggaggaagattctgaagaagaaacagatggaggagaggaggaagagcaggat
acttcgaggttgatgccgcgtagggttttacaaggcgatggaggggctacgacgtcgtca
caagaagcggtggttaatgttcaaggttccgagagtataatggagacgatggctgaggat
ggaggagctcaaggtgcgaaaccggtcgagaaattggcagtgattaacagtgaggtggtg
gacggcagtggcggtgggggagaggagtggagtaggagtgacattgatggcttgttttgt
ccaatttgtatggaggcttggtctaacggtggtaaccatcaaatctgttgtcttccttgt
gggcacatatatggtatatcttgtatcaagaaatggttacaacagagaaaaagttccgga
aagtgtcctcaatgcaataaaaaatgtacaatgaaggatgtccgactgctttatgcatct
caacttcatgttgtagatgaagagctacaaaagaaaattcaatcacttgaagctcaatgt
gcttcactggagaagaagtgttcagatttgtgcaagaaagaagttgagtgggaaaggaag
gaagcaaatttacaattgcaagtgcgcgagttaaaggagaggagaactaattccgattat
ttgcctagagacaagcaaagcaggccatcagaattgtacacttctgggcatagttgcaac
tatgcttggcgcggatatttcaatgggttttccttgaaggaagagatgaggatcgaaggt
gctcgcttctttgacgtcgatgtttctggtcaaattctcataattgccagaaggcttcct
ggaatggggggaattcatgtgcttacaaaaatgagtttgttatctcatcatgaaaaggaa
gatattcagcttcctttgaacataaaagctatcaaagaccttcacatatcaccatacgac
agacttgtgcttgtggcttctttggggaagaagttgtcggttcttagtacagaaagcaac
aatacagttctgacgtatgatttaccggctgcggcttggtcttgttcatgggatgttaac
aattcctattatgtttatgctggtttacagaatggtatggtaatggagtttgataggcgt
caaactgtgaaaccggtggaatccatgaatggattagcagccaagcctattcatactgtg
cactccgttttaagtaatccagtaacgggttctggtttgagaagaagcattctaactgcg
tcttcagtaggcttgtgtcattggaactttggttgtagtgaggaaaggccgcaccttatt
cctgaatcagaggatcaaggagtttgtatttctctagcttatgcatcaagaaccaatgac
attgttgcctcattccgccctaaagtggaaatgccaggcgacttcgctgctactcaaaca
atgctttctccctctgcttctcccatggaacaggcagtacaaggctctcatgttgtctac
agggtagcaggtagtggttatcacaaggtgggatcttcttgcgcaaatgtgagtggtatc
cggttccccaagtctacgatcatagaaagagatggtacaaagcctatatttgcttacggg
gatgaagcatccagtgagctggtgttgcaagagttgccatctctgaaggatgttatgcgg
ctccaagctcctagaaatcccatccgtgatgtgaagtatacacatgcattaaattccgga
ctgctgagttgtttgcgccaggatacaatgcagctttttaccgttaatggttcatga
DBGET
integrated database retrieval system
