Ipomoea nil (Japanese morning glory): 109163636
Help
Entry
109163636 CDS
T04663
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109163636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109163636
03009 Ribosome biogenesis [BR:
ini03009
]
109163636
04131 Membrane trafficking [BR:
ini04131
]
109163636
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ini04147
]
109163636
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109163636
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109163636
Membrane trafficking [BR:
ini04131
]
SNARE
SNARE associated proteins
Others
109163636
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109163636
Exosome [BR:
ini04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109163636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
AAA_18
ATPase_2
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
Vps4_C
AAA_7
NACHT
NB-ARC
TsaE
AAA_24
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
109163636
NCBI-ProteinID:
XP_019167922
LinkDB
All DBs
Position
Un
AA seq
808 aa
AA seq
DB search
MSNQAESSDSKGTKRDYSTAILERKKAPNRLVVDEAINDDNSVVSLHPNTMEKLQLFRGD
TIMIKGKKRKDTVCIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDFFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
ESALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEREKKRREN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
ASTGGGAATGSDPFATSAGGADEDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaagcggaatcatctgactcgaaggggacgaagagggattacagtacggcg
attcttgagaggaagaaggcgcccaaccggttggttgtggatgaggcgatcaatgatgac
aactctgtagtgtctcttcaccccaacactatggagaagctccagctcttccgtggtgat
actatcatgatcaagggtaagaaaagaaaggatacagtctgcattgctcttgctgatgac
acatgtgaagaacctaagattaggatgaacaaggttgttaggaacaacctcagagtgagg
cttggagatgttgtttccgtccaccagtgtcctgatgtcaagtatggcaaacgtgttcac
attcttcctgtggatgacaccattgaaggagttactggaaatctctttgatgcttacttg
aaaccatatttccttgaatcataccgaccagtgaggaagggcgacttctttcttgtgaga
ggtggaatgagaagtgttgagtttaaggttattgagactgaccctggcgagtactgtgtt
gttgcccctgatactgaaatcttctgtgagggcgaacctgtgagaagggaagatgaggat
cggttggatgaggttggatatgatgatgtcggtggtgttcgtaaacagatggctcagatc
agggagcttgttgagcttcccctaaggcatccgcagctcttcaaatcaattggtgttaag
cctccaaaaggaatccttctatatggacctcctggttcagggaagactttaatagcgagg
gcggttgcaaatgaaactggtgctttcttcttctgcattaatggaccagaaattatgtcg
aaattggcaggagaaagtgaaagcaatcttaggaaagcgtttgaggaagctgagaagaat
gcaccatcaatcatcttcattgatgagattgattcaattgctcccaaacgagagaagaca
aatggagaagttgagaggaggattgtttcacagctactgacacttatggatggactgaaa
tctcgtgcacatgtcattgtcatgggtgccacgaatcgtcccaatagtattgatcccgca
ctaaggaggtttggaagatttgacagggaaatagacattggcgttcctgatgaagttggg
cgtcttgaggttcttcggatacataccaagaacatgaagcttgctgaagatgttgatttg
gaaaagattgccaaggatactcatggttatgttggcgctgatttagcagcattgtgtact
gagtctgctcttcagtgcattagagagaagatggatgttattgatttggaagatgaaacc
atcgatgcagaaatactcaactcaatggctgttaccaatgagcacttccaaactgctctt
ggaacgagcaatccttctgcattgcgtgaaactgttgttgaagttcctaatgtctcctgg
gaagatattggtggcctagaaaatgtcaagcgggagctccaagagactgtacaatatcca
gtggagcatcccgagaagtttgagaagtttggaatgtctccgtcgaagggagttcttttc
tacggcccgcctggatgtggtaagactttgttggccaaggctattgccaatgaatgccaa
gcaaatttcatcagtgtcaaaggcccagagttgcttacaatgtggttcggggagagtgag
gccaatgttagagagatatttgacaaggctcgccaatctgctccttgcgtcctattcttt
gatgaattggattcaattgctacacagagaggaagttcggtaggagatgccggtggggct
gctgatagggtcttaaatcaactcctcacagaaatggatggaatgaatgctaagaagaca
gttttcattattggggctacaaacaggccagacataattgatcctgctcttctgcgtcct
ggccgtcttgaccaattgatttacattcctcttcctgacgaagactcccgccatcaaatt
ttcaaggcgtgcctgaggaagtctcccgtttccaaggacgtagacctcagagctcttgcc
aaatacactcaaggcttcagcggggccgacatcacagaaatctgccagcgctcttgcaaa
tatgccatcagagagaacattgaaaaggatatcgagagggaaaagaagaggagggagaac
cccgaggccatggaggaggacgttgaagatgaggtagccgagatcaaggctgctcatttt
gaagaatcaatgaagtacgctcgcaggagcgtgagcgatgctgatatcaggaagtaccag
gcatttgcacaaaccctgcagcagtcccgaggtttcggttctgaattccgattctcagag
gccagcacagggggaggagctgccactggatctgatccttttgcaacttcagccggtgga
gctgatgaagatgacttatatagttag
DBGET
integrated database retrieval system
