Ipomoea nil (Japanese morning glory): 109163647
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Entry
109163647 CDS
T04663
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109163647
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ini01009
]
109163647
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109163647
03036 Chromosome and associated proteins [BR:
ini03036
]
109163647
Protein phosphatases and associated proteins [BR:
ini01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109163647
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109163647
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109163647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
TetR_C_16
OLF
Motif
Other DBs
NCBI-GeneID:
109163647
NCBI-ProteinID:
XP_019167945
LinkDB
All DBs
Position
Un
AA seq
486 aa
AA seq
DB search
MLNKFIKRGHRKVPKPDDGEFGDGAPGRRGSGSVSVASVVVNHSSIGMNSVQSALFSVPT
PAPAPVTIETLPRFRDVPASEQQNLFLRKLQICCFQFDFKDMLKMMREKDIKRQTLVELI
EFIQSGSGKICDSNQEELIKMISINIFRCLPSALHEITGSENADAEEDEPYLEPSWPHLH
LVYELLLRYVVSSETDAKVAKRFIDHTFLLKLLDLFNSEDPREREYLKTILHRIYGKFMV
HRPFIRKAIGNIFYRFIYESDKHSGIGEILEILGSIINGFALPMKEEHKLFLVRALVPLH
KPKSVATYHQQLSYCIVQFVDKDYKLADVVIRGLLKCWPVTNCQKELLFLAEIEEVLDAT
QASEFQRCMVPLFKQIASCLSSLHFQVAERALFLWNNEHIVSLISQNRNVILPIIFEALE
KNIQDHWNTSVNGLTVNVRNMFVEMDADLFEECQRQYAERVARTAEVEGQRELRWQKLTT
AAANGG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataagtttataaaaaggggacaccggaaggtgccgaagccggatgatggggaa
tttggcgatggggcgccgggaaggcgaggctctggctcagtttctgttgctagtgtggtg
gtgaatcattcttcaattggaatgaattctgtgcagtcggcgcttttttctgtgccgaca
ccggcaccggcgccggtgactattgagaccttgccgaggttccgcgacgtgccggcatcg
gagcagcagaacttgtttttgaggaagcttcagatatgttgcttccagttcgacttcaag
gatatgttgaagatgatgagggagaaggatatcaagaggcagacccttgtggagctcata
gaatttatccaatcgggttctgggaaaatctgcgacagcaaccaggaggaactgataaag
atgatatctatcaatattttccggtgcttgccttcggctttgcatgagatcacgggatca
gagaatgcagacgctgaagaggatgagccctatcttgagccttcatggccacatttacat
ctagtatatgagctgcttttgcggtatgtggtttcatctgaaactgatgcaaaggtggca
aagcggttcattgatcacacgttccttttgaagttattggatttgtttaactccgaggac
ccaagggaaagagagtatttaaagacaattcttcaccgcatatatgggaaattcatggtg
caccggccatttatcagaaaggcaattggtaatatcttttatcggttcatatatgagtca
gataaacacagtggcataggtgagattttggagattttagggagtataataaatgggttt
gcattgccaatgaaggaggaacacaaactgtttcttgttcgggcacttgtaccgcttcac
aagcccaagtctgttgcaacatatcatcagcagttgtcatactgtattgttcagtttgtg
gataaggattacaagttggctgatgtggttataagaggtttgttgaaatgctggcctgtc
actaattgccaaaaggagcttctttttcttgcggaaattgaagaagttttggatgccaca
caggcatcagaatttcagcgctgcatggttccgctttttaaacagatagcttcttgcctt
agcagtttacactttcaggttgcagaacgtgcactatttttgtggaacaatgaacacata
gtaagcctgatttcccagaatcggaatgtcattttgccaattatctttgaggctctggaa
aagaatatacaagatcattggaatacaagtgtcaatggtctgactgtcaatgtccggaat
atgttcgtggaaatggatgctgatttgtttgaggagtgccaaagacagtatgcagagaga
gtggctcgtactgcagaagtggaagggcaacgagaattaaggtggcagaaactaacaact
gcagcagccaatggaggctaa
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