Ipomoea nil (Japanese morning glory): 109164495
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Entry
109164495 CDS
T04663
Name
(RefSeq) elongation factor 1-alpha
KO
K14416
elongation factor 1 alpha-like protein
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109164495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109164495
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109164495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Zn_ribbon_RanBP
GTP_EFTU_D4
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
109164495
NCBI-ProteinID:
XP_019168562
LinkDB
All DBs
Position
Un
AA seq
709 aa
AA seq
DB search
MPRKVNYGTGYGYDDDDYYNYDDDDYYNYEDDGHDYAEETVVVSKAKVKQDTPKLGVWRC
PICTFDNEDSMSACDICGVLRNPLVKGSRDSSTKVGTSRDSEASKLAKSLFASLLQQNPK
KAVTFEGKSDVFKSEGHFNFHEHGRIHGHFQDLLKAFSCQNHYKFNIEPFKFDTPSLDDM
VSSGVHSSRVGSKATSNKILQSNASSGKDEMMTGAKTELIAGGSSIPIAKFGPNEIKQSA
SSQNSSKQGLRKSMKNLSVSSKSQSTEKGSIHDDVEDKLSQLNLAVVGHVDSGKSTLSGR
LLHMLGHISKKDMHKNEKEAKQLGKGSFAYAWALDESAEERERGITMNVAVAFFNTKNYR
VVLLDSPGHRDFVPNMISGATQADAAILVVDASMGAFEAGIDASGGQTREHALLIKSFGV
DQIIVAVNKMDSVQYSKERFDAIKKQLGTFLRTCKFKDSSIVWIPISAMENQNLFTGPSD
AQFLSWFQGSSLVDAIDSLQPLVRDYSKPLLMPICDIVKSQSQGHVSVCGKLETGSLETG
FKVLVMPTREIATVRSLERNLEVCRSAKAGDNVTVNLQGIDGHRVMAGGVLCDIDYHVPV
TNHLELKVLTLDISTPVLVGSQLEFHVHHAKVAAKVVKLLSLLDPKTGKETKKSPRCLLS
KQNAVIEVCLQLPVCVDEYANCRSLGRVSFRALGRTIALGLVTKVLEQM
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtcaattatggcactggttatggttatgatgacgatgattattacaat
tatgatgatgatgattattacaattatgaggacgatgggcatgattatgcagaagaaact
gtagtagtatcaaaagcaaaggtgaaacaagacacccctaagcttggggtctggcgttgc
cccatctgcacatttgataatgaagacagtatgagtgcatgtgatatatgtggggtccta
agaaatcccttggttaaaggttctcgtgacagcagtactaaagttggcacatccagagat
tctgaagcatccaaactggccaagtctctatttgcatcactgctgcaacagaacccaaaa
aaggctgtaaccttcgaaggaaagagtgatgtttttaagtcagaaggccattttaacttc
cacgagcatggaagaatacatggacactttcaagatttacttaaagcttttagctgtcaa
aaccattataagtttaatatagagccattcaagtttgacactccatctctggatgatatg
gtgtcaagtggagtgcattcgtctagagtgggttccaaagccaccagtaacaagattcta
cagtcaaatgcctcatcaggtaaagatgaaatgatgactggtgctaaaacagaactgatt
gcaggagggtcttcaataccaattgcaaaatttggaccaaatgagattaaacagagtgct
tcttcacagaatagtagcaaacaaggtctcagaaaaagtatgaaaaacttgtcagtttct
tccaagtctcagagtacagagaaaggcagcatacatgacgatgtggaagataaactgagc
cagctaaatcttgcagttgttggtcatgttgattctgggaagtcaacgctatccggaagg
ttgctacacatgttaggacatatatccaagaaagatatgcacaaaaatgaaaaagaggct
aaacaactggggaaagggtcctttgcttacgcttgggcattggatgagagtgctgaggaa
agagaaagagggatcactatgaatgtcgcggttgcatttttcaacactaaaaattatcgt
gttgttcttcttgactccccgggtcatagagactttgttccaaacatgatatctggtgca
acacaagcagatgctgcaattcttgtagtagatgcttcaatgggtgcatttgaagcaggc
attgatgcttctggaggacagacaagggagcatgcactgcttattaagagctttggtgtg
gatcaaattatagtcgcagttaacaaaatggattctgttcaatactccaaagagcggttt
gatgcaattaaaaagcaacttgggacctttctccgtacctgtaaattcaaagattcttct
atagtatggattccaatcagtgccatggagaaccaaaatttgtttacaggtccttctgac
gcacagtttttatcatggtttcagggctcatctctagtggatgcaattgattctctccag
cctcttgtgagagattactcaaagcctctgcttatgccaatatgtgatattgttaaatca
cagtcacaaggacatgtatcagtatgtgggaaactggagactggatctcttgaaactgga
tttaaggttctggttatgccaacaagagaaattgctactgtgcgtagtttggagcggaac
ttggaagtatgtcgcagtgcaaaggctggagacaatgtgactgttaatctacagggtatt
gatggacaccgggtgatggctgggggcgtgttatgtgacatcgactatcatgttccagtt
acaaaccatttggaattgaaggttcttactctagatatctcaactccagttttggttggt
tctcagttggaatttcatgtccatcatgcaaaggtggctgcaaaagttgtgaagctattg
tcattgcttgatccaaagacagggaaggagacaaagaagtcacctcgctgtctattatca
aagcaaaacgccgttattgaggtgtgtttacaactgccggtttgtgtggacgagtatgcc
aactgtagaagtctaggaagggtctcattcagagcattaggaagaactattgcccttggt
ctcgtgactaaagtactggaacaaatgtaa
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