Ipomoea nil (Japanese morning glory): 109164827
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Entry
109164827 CDS
T04663
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109164827
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109164827
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109164827
NCBI-ProteinID:
XP_019168919
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All DBs
Position
Un
AA seq
396 aa
AA seq
DB search
MAASIPSLLLLSWFLSVYSPPTSLAHQTSHYATKTLLNSYPPNNLMNMIDSCWRSNPHWA
SNRHALADCAIGFGSEAAGGKNGKIYVVTDPSDDDPINPKPGTIRYGAIQTEPLWMVFEK
DMVITLENELMVNSYKTIDGRGAKVEIANGPCVTIENVTNVIVHGISIHDCKPGKRGMVR
SSPDHVGERIGSDGDAISVLASSHVWVDHCFLARCADGLVDVIHASTAITISNNYFTQHD
KVMLLGHRDSYTADRVMKVTVVFNHFGRDLVQRMPRVRHGYAHVANNYYDQWLQYAIGGS
AGPTILSEGNYFVASDDVPADDKEVTKRESNGGWKTWRWRSTKDVFLNGAYFVPSGYGSC
SPSYATSQLFVAAQGSLVPSLTSHAGPLQCVVGEKC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcaattccatctctattactactctcatggttcctatcagtatattcaccc
ccaacatcactagcacaccaaacaagccactatgcaaccaaaaccttattaaactcttat
cctccgaataatctcatgaacatgattgattcgtgttggagatctaacccacactgggcc
agcaatcgccatgcattggccgattgcgcaattggctttgggagtgaagcagcaggtggg
aaaaacgggaagatatatgtagtcacggacccttctgacgacgaccctataaaccccaaa
ccagggacgatacgttatggggcaatccaaaccgagccgctttggatggttttcgagaag
gacatggtgattacgctagagaatgagctgatggtgaatagctacaagaccatagatggg
agaggtgctaaggttgagattgcgaatgggccgtgcgtgacaattgagaatgttacgaat
gttattgttcatgggattagcattcatgattgtaagccggggaaacgtgggatggtccga
agtagtcccgaccacgttggagaacgaattgggtctgatggtgatgcgattagtgtttta
gcatcctcccatgtttgggttgaccattgctttcttgctcgttgcgccgatggcctcgtt
gatgtcattcacgcctccactgcgattaccatctccaacaattatttcactcaacacgac
aaagttatgttgcttggacacagagacagctacacggcagaccgagttatgaaagtcact
gtggtgtttaatcatttcggccgagatcttgttcagagaatgcctagggttcgacacggt
tatgctcacgtagccaacaactactacgaccaatggctacagtacgccattggagggagc
gcaggtccgacgatactaagtgagggcaactatttcgtggcttcagatgatgttccagcc
gacgacaaagaggtgacgaagagggagagtaatggaggttggaagacatggagatggagg
tctactaaggatgttttcttgaatggggcttactttgttccatctggatatgggagctgt
tctccctcgtacgccacatcgcagttgtttgttgctgctcaggggtctttggttccttcc
ttgacctctcatgctggccccttgcaatgtgttgttggtgaaaaatgttga
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