KEGG   Ipomoea nil (Japanese morning glory): 109165046
Entry
109165046         CDS       T04663                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03082  ATP-dependent chromatin remodeling
ini03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109165046
   03083 Polycomb repressive complex
    109165046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ini03036]
    109165046
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     109165046
  Histone modification proteins
   HAT complexes
    HATB complex
     109165046
   HDAC complexes
    Sin3A-HDAC complex
     109165046
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     109165046
    PRC2.2
     109165046
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     109165046
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109165046
  Chromatin remodeling factors
   NuRD complex
    109165046
   NuRF complex
    109165046
   NuRF complex (fruit fly)
    109165046
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st WD40_RFWD3 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 eIF2A Beta-prop_RIG_1st Beta-prop_HPS5 MIOS_WD40 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 109165046
NCBI-ProteinID: XP_019169193
LinkDB
Position
Un
AA seq 422 aa
MGKDDDEMRSEIEERLVNEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQIQLPLEDAENDARHYDDDRSDTGGGFGCANGKVKII
QQINHDGEVNRARYMPQNQFIIATKTVSAEVYVFDYSKHPSKPPFDGACNPDLRLKGHST
EGYGLSWSQFKQGHLLSGSDDAQICLWDISATPKNKALDAMQIFKIHEGVVEDVAWHLRH
EYLFGSVGDDQYLHIWDLRTPSVTKPIHSVVAHNGEVNCLAFNPFNEWVVATGSTDKTVK
LFDLRKITSPLHTLECHKEEVFQVGWNPKNETVLASCCLGRRVMVWDLSRIDEQQTKEEA
EDGPPELLFVHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHEDDDLPIDG
AT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggggaaagacgatgacgaaatgaggagcgagatagaggagaggctagtaaacgaggag
tacaagatttggaagaagaacactccgtttctctacgatctggtcataactcacgctctc
gagtggccttcgctcaccgtcgaatggctccctgaccgggaagagccgccggggaaggat
tattccgtccagaaaatgatcctcgggacccacacgtccgagaatgagcccaattatctc
atgctcgcccagattcagctcccgctcgaggatgctgagaacgatgctcgtcactatgac
gacgatcgctccgataccggtggcggctttggttgtgccaatgggaaggtaaaaataatt
caacaaataaatcatgatggagaagttaatcgagctcgttatatgccccaaaaccaattt
attattgccacgaagacagtcagtgctgaagtttatgtttttgattatagcaaacatcca
tctaaacctccttttgatggcgcatgcaaccctgatttgaggctaaagggccacagcact
gaaggatacggtctgtcttggagtcagtttaaacaaggtcatttgttaagtggatcagat
gatgctcagatttgcttgtgggatattagcgccactccaaagaataaggcccttgatgcc
atgcagatatttaagattcatgaaggagttgtagaagatgtagcttggcatcttagacac
gaatatctatttggttcagttggagatgatcagtatctacacatctgggatttgagaaca
ccttcagtaaccaagcctattcattctgtagttgctcataacggtgaggttaactgctta
gcattcaacccttttaatgaatgggttgtagcaacaggatctactgataagacagtgaaa
ttgtttgacctacgcaagatcacttctcctctccatactcttgaatgtcataaggaggag
gtttttcaggttgggtggaatcctaagaatgagactgtcttagcttcttgttgtcttggt
cgcagagtcatggtctgggaccttagcaggattgatgagcaacaaaccaaagaggaagca
gaagatgggccaccggagttgctgtttgtgcatggtggccataccagtaaaatttccgac
ttctcatggaacccatgtgaggattgggtcgttgctagtgtagccgaagataacattcta
caaatctggcaaatggcagagaacatctaccatgaagacgacgatctacccatagatggc
gctacctag

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