Ipomoea nil (Japanese morning glory): 109165066
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Entry
109165066 CDS
T04663
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109165066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109165066
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109165066
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
HECT type E3
109165066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
HEAT_EZ
HEAT_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
109165066
NCBI-ProteinID:
XP_019169221
LinkDB
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Position
Un
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AA seq
1894 aa
AA seq
DB search
METRSRKRAEATSSAPSSSSSGPTTRAAKRARLNTSAPTPTTATATASNSASIATRSRVP
TRSRAANRSQDSIAASAPMDSTNESSGSATRSRRGRNPTHTSDKDSSDKGKQKEHEVRSR
GRDRDAERNIGLNLESGGGDDDENDSEGGVGILQHNLTSANSALQGLLMKLGAGLDELLP
SAAMGSGSSSHQNGRLKKILSGLRADGEEGKQVEALTQLCDMLSIGTEDSLSTFSVDSFV
PVLVGLLNHESNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAE
QSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFV
MEAVPLLTNLLQYHDAKVLEHASICLTRIAEAFGSSPEKLDVLCNHGLLTQTASLISASN
SGGGQASLSTSTYTGLIRLLSTCARGSPLGTKTLLLLGITGILKEILSGYGLLSNVSVSS
AFNRPPEQIFEIVNLANELLPSLPDGTISLPVSTNVFVKGSLNKKSIGGESSKQEDANAT
SQEVSSREKLLKEQPELLQQFGIDLLPVLIQIYGSSVNGLVRHKCLSVIGKLMYFSTADM
IQSLNSITSISSFLAGVLAWKDPQVLVPALQIAEILMEKLPGTFAKMFVREGVIHAVDAL
VIASSGTASQPSSSEKDNDCIPASSSRSRRYRRRGCNSNTDTFSTEDPKSSVPNIGSPPN
PREVPTASSSLRMAVSARAKAFKEKYFPSDPESTEAGVTDDLLCLKNLCAMLNATLDGQV
IKTKGKSKASGPRLGEISAGKEESLIGLITEMLGELSKGDGVSTFEFIGSGVVESLLKYF
SCGYFSKERISDPHLSRLRQQAIKRYKSFIAVALPVGVDEGNLAPMSVLVQKLQNALSSL
ERFPVARLSSGLSALSQPFRLRLCRAQGEKSLRDYSSNIVLIDPLATLAAIEDFLWPHVH
RTESEQKTSASVGNSETSTMPTGAGAPSPSTSTPASRRHSTRSRSVVNITDAAKGSSQEK
NASSLKGKGKAVLKSAQEEGRGPQTRYASHRRAALDKESEVNPVDGNSTSEDEDIPPVEV
DSPLVIEDDDISDDEDEDEDDHDDVLRDDSLPLCMPDKVHDVKLGDSDASPVANAPSDSQ
TNAGGGSCSIAASLRGPDSSEFRSGSSYGSRGAMSFAAAAMAGLTSRGVRGGKDRQGRSL
FTSNDSGRLIFSTGGKQLNKHLTIYQAIQRQLVLDEDDDERYGEGDFVLSDGSRIWSNIY
TITYQRAGSQAERGVNGAGTSTSSKSTKASSSADLSEDSLPHQVSLLDSILQGDLPCDLD
KSNPTYNILSLLRVLEGLNQLAPRMRVQSVIDSFSEGKICSLDELNVSGAKIPSDKFVNS
KLTPKLARHIQDALALCSGSLPSWCYLLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQ
QQQGAEGTGLTNEREVRLGRLQRQKVRVSRNRILDSAAKVMEMYSTQKAVLEVEYFGEVG
TGLGPTLEFYTLLSHDLQKAGLGMWRTSLHPNKHAAEMDVDERVNGKVGDTSGSNSDGGD
KDLILAPLGLFPRPWPPSAENIEDGKFSKVIEYFRLLGRVLAKALQDGRLLDLPLSTAFY
KLVLGQELDLYDILSFDAELGKTMQELQALVCRKQYLESTGGDNRDKSHKTTDLYFHGTP
VEDLCLDFTLPGYPEYILKPGDENVDLNNLEEYISLVVDATVKTGIVQQMEAFRSGFNQV
FDISTLQIFSPNELDHLLCGRRELWKAETLVDHIKFDHGYTAKSPAIINLLEIMGEFTPE
QQRSFCQFVTGAPRLPPGGLAALNPKLTIVRKHSSNTGNVGQNGNGASESADDDLPSVMT
CANYLKLPPYSTKEMMYKKLVYAINEGQGSFDLS
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacctcatcagcgccttcttcttcttcc
tctggtccaaccacccgagctgccaagcgagctcgtttgaacacctccgcacctactccc
actactgctaccgccactgcctctaattccgcgtcgatcgctactcgttcccgagtgccc
actcgttctcgtgctgccaaccgttcccaggactcaattgcagcttccgcaccgatggac
tccaccaatgaatcctctgggtctgccacccgcagtcgccgcggtaggaaccctactcat
acttccgataaggacagttcggataaaggcaaacagaaagaacacgaggttaggagtagg
ggaagggatagagatgctgaaaggaacattgggttgaatctagaatctgggggaggtgac
gatgatgaaaatgacagtgaaggaggtgttggaattttgcagcataatttaacttctgca
aacagtgcacttcagggtctgctcatgaaactgggtgctgggttggatgagttgcttcca
agcgcagcaatgggttcagggtcttcctcgcatcaaaatggtcggctcaagaagatattg
tccgggcttagggcggatggcgaggaaggaaagcaagtagaggctttgacacagctttgt
gatatgctttccatagggactgaggattcactcagcactttctcagtggattcgtttgtt
ccagtgttggtcggtttacttaatcacgagagtaatccagatatcatgcttcttgctgcc
agggcattgacccatctggttgatgttctaccatcttcatgtgcggcagttgtacattat
ggtgcagtttcatgctttgttgctcggctgctcacaattgaatacatggacttggctgaa
cagtctttacaagctctaaagaagatatctcaggagcaccctacagcttgtttgagagct
ggtgcacttatggctgtgctctcataccttgatttcttctctactggagttcagagagta
gcattatctactgctgcaaatatgtgcaagaaactcccatcagatgcagctgattttgtt
atggaagctgttccattgttaacaaacctccttcagtatcatgacgccaaggttctagaa
catgcttccatctgcttgactcgaattgctgaggcatttggatcttctcctgagaagttg
gatgtactgtgtaatcatggacttcttacacaaactgcttctcttatctctgctagtaat
tctggcggtggtcaggcttcccttagcacttcaacatacacaggcttgattcggcttcta
tcaacatgtgcacgtggctctcctctgggaacaaaaactttgcttctccttggaatcact
ggcattcttaaagaaattctttctggatatggtcttctcagcaatgtatctgtttcatct
gcttttaatagaccaccggagcagatttttgaaattgtgaacctggctaatgaacttctc
ccctcattacccgatggaacaatctctcttccagtcagcactaatgtgtttgtcaaggga
tctttaaataagaaatctatcggtggtgagtctagcaaacaggaggacgcaaatgcaact
tctcaggaggtttcatcccgtgagaaactgttaaaagagcagcctgagcttctgcagcaa
tttggaatcgacctccttcctgttctaatccagatatatgggtctagtgtgaatggtctt
gttcggcacaagtgtctctcagttattgggaaacttatgtacttcagcactgctgatatg
attcagtccttgaatagcatcactagcatatcaagttttttggctggtgttttagcctgg
aaagatcctcaagtattggttcctgcccttcaaattgctgaaatcttaatggaaaagctc
cccggtacttttgccaaaatgtttgttcgagagggtgttattcatgctgtagatgcacta
gtaatagcttcttctggcactgcttctcagccatcatcctctgagaaggataatgattgt
atacctgcttcatcatctcgttccaggcgttatcgacgtcgaggctgtaattcaaataca
gatacattctccactgaagatcctaaaagttcagttccaaacattggctcacccccaaat
cctagggaagttcctactgccagttctagtcttcgcatggcagtcagtgctcgtgcaaaa
gctttcaaagaaaagtatttcccttcagatcccgagtctactgaagctggtgttacagac
gatcttctttgcctgaagaatctttgtgctatgctgaatgccactcttgatgggcaagtg
attaaaaccaagggaaaatcaaaagcttctggccctcgacttggtgaaatttccgctggt
aaagaggaaagtttaattggtctgataactgagatgctgggggagcttagcaagggagat
ggtgtttccacctttgagtttattggaagtggtgttgtggagtcgttgctgaagtatttt
tcatgtggatacttctctaaggaaagaatttcagatcctcatctttctaggcttcgacaa
caagcaatcaaaagatacaagtcttttattgctgttgcccttcctgttggtgttgatgaa
gggaatttggctcctatgagtgttttggttcaaaagcttcaaaatgctctctcttccttg
gagcggttccctgttgcacgcctttcttctggcttaagtgctttatctcaacctttcagg
ctgcgtctttgtagagcacaaggtgaaaagtcccttcgtgattattcgtcaaacattgta
ttgattgatccacttgcaactttagctgccatagaagacttcctctggccccatgttcac
agaacggaatctgaacaaaagacctctgcatcagttggcaattctgagacaagtaccatg
cctactggagctggtgcaccatctccatctacttcaactcctgcttctcgtcgccattct
acgcgatcaaggtctgttgtgaatataacagatgctgcaaagggatcatcacaagaaaaa
aatgcaagctcattaaaaggaaagggtaaggctgttctgaaatcagctcaagaagaggga
agaggaccacaaacaagatatgcttctcatagaagagctgctttggataaagaatcagaa
gttaatcctgtggatgggaactccacttctgaggatgaggacattcctcctgttgaagtt
gacagtcctttggtgattgaagatgatgatatctctgatgatgaagatgaagatgaagat
gaccatgacgatgttttgagggatgattcacttcctctttgcatgcctgataaagtgcat
gatgtgaaactgggtgactctgacgccagtcctgttgccaatgcaccaagtgatagccag
acaaatgctggtggtggttcttgcagcatagctgcttcccttcgaggacctgattcttct
gagtttaggagtggaagttcttatggttctaggggtgcaatgtcatttgctgcagctgca
atggcaggactaacgtccagaggtgtgaggggaggaaaggaccggcaaggacgttctctc
tttacttctaatgattctggaagattaatattttccacgggtgggaagcagctaaataag
catttgactatttaccaggccattcaacggcaacttgtcctagatgaagatgatgatgag
agatatggggaaggtgattttgtattgagtgatggaagcagaatttggagcaacatttac
accatcacataccaaagggcaggcagccaagctgagaggggtgtgaatggtgctggtaca
tcaacttcctccaagtctacaaaagctagttcttcagcggatttaagtgaagattcctta
ccgcatcaagtatcactattagatagtattttgcagggagatcttccttgtgatcttgat
aaaagtaaccctacatataacattttatcacttctacgggtactggagggtttgaatcag
cttgcaccgcgtatgcgggtccagtcagtgattgacagtttctctgaaggaaaaatatgt
agtctagatgaactaaatgtcagtggtgccaaaattccttcagataagtttgtcaatagt
aagctcactccaaagttggctcggcatatccaggatgcactcgcactctgcagtggatct
cttccatcatggtgttaccttttaacaaaggcttgtccctttctgttcccatttgagact
aggcgtcagtacttttattcaactgcttttgggttgtctcgagcattatatcggcttcag
cagcagcaaggtgctgagggtactggattgacaaatgagagagaggtaaggcttgggagg
ctacagcggcagaaagtccgggtctccaggaatcgcatattggattctgctgcaaaagta
atggagatgtactctacccaaaaagctgttcttgaagttgaatattttggcgaagttgga
acaggattgggtcctactctagagttttatacccttctaagtcatgacctacagaaagca
ggactaggaatgtggagaacaagcttacatcccaataaacatgcagcagaaatggatgtt
gatgagcgagtaaatggaaaagttggtgatacctctggctcgaactcggatggtggtgat
aaagatcttatcttagcacctcttgggttattcccacgtccttggcctccaagtgcagaa
aatattgaggatgggaaattctctaaggtaatagaatatttccggctactaggacgtgtg
ttggcgaaagcccttcaagatgggcggcttttggaccttccactgtctactgccttctat
aagcttgtacttggtcaggaacttgatctgtatgatattctttcttttgatgctgaactg
ggtaaaactatgcaagagttgcaagctcttgtatgtcggaagcaatatctagaatcaact
ggaggtgataacagagacaaaagtcacaaaaccactgatttatactttcatgggactcca
gttgaagacctttgcttagatttcactctcccaggctatcctgaatatattctgaaacct
ggggatgaaaatgttgatcttaataatttggaggagtacatatctctagtggttgatgca
acagtcaagactggaattgtgcaacaaatggaagcgtttagatctggcttcaatcaggta
tttgatatttcaaccctacaaatattttctccaaatgagttggaccatttgctttgtggc
cgtcgagagttgtggaaggctgagacactggtggatcacatcaagtttgaccatggttac
actgctaagagccctgccattataaatttgctggagatcatgggtgaattcactcctgaa
cagcaaaggtctttctgtcaatttgttactggtgctcctcggcttcctcccggtggcctg
gcagcgttgaatcccaagttgacaattgtgaggaagcattcttcaaacactggaaatgtg
gggcaaaatggtaacggggcatcagagtctgcagatgatgacctgcctagtgtaatgact
tgtgctaattacctgaaacttcctccatactccaccaaggaaatgatgtacaagaagttg
gtgtacgcaatcaatgaaggtcaaggatcctttgatttatcgtag
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integrated database retrieval system
