Ipomoea nil (Japanese morning glory): 109165153
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Entry
109165153 CDS
T04663
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00100
Steroid biosynthesis
ini00909
Sesquiterpenoid and triterpenoid biosynthesis
ini01100
Metabolic pathways
ini01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109165153
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109165153
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ini01006
]
109165153
Enzymes [BR:
ini01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109165153
Prenyltransferases [BR:
ini01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109165153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
109165153
NCBI-ProteinID:
XP_019169346
LinkDB
All DBs
Position
Un
AA seq
414 aa
AA seq
DB search
MGSLGAMLKHPDDVYPLIKLKIAARQIEKQIPPQPHWGFCYTMLQKVSRSFALVIQQLPI
ELRDAVCIFYLVLRALDTVEDDTSIATEVKVPILIDFHRHIYDREWHFLCGTKDYKVLMD
QFHHVSTAFLELGKNYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRQIWSKYVNKL
EELKYEENSVNAVQCLNDMVTDALSHVEDCLTYMSALRDPSIFRFCAIPQIMAIGTLAMC
YNNIGVFRGVVKMRRGLTAKVIDRTRTMEDVYGGFFDFSCMLKSKVDHNDPTASKTLKRL
EIILKTCRDSGTLNKRKSYILRAEPNYTPALIIVFFIILAILLGYLSGNKPHSV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagcgatgttgaagcatccggacgacgtgtacccgctgattaagctg
aagattgcggcgaggcagatcgagaagcagatcccgccgcagcctcactggggattctgc
tacaccatgctccagaaggtctctcgaagcttcgctctcgttatccagcagctccctatc
gagcttcgcgacgccgtgtgtattttctatttggttcttcgagcacttgacactgttgag
gatgatacaagcatagccacagaagttaaagtacctattctgatagattttcatcgtcac
atatatgaccgtgaatggcatttcctgtgtggaacaaaggactataaagttctcatggac
cagttccatcatgtttctactgcttttctggaacttgggaaaaattatcaggaagcaatt
gaggatattaccatgaggatgggtgcagggatggcaaagtttatatgcaaggaggtcgaa
acaattgatgattatgatgaatattgtcattatgttgctgggcttgttggattaggcttg
tcaaaactttttcatgcctctgggacagaggatttagcttcagattctctctcgaattct
atgggtctgttccttcagaaaacaaacattattagggattatctggaggatattaatgag
ataccaaagtgtcggatgttttggccccggcaaatttggagtaaatatgtcaacaaactt
gaggagttgaaatatgaggagaactcagtgaatgcagtacaatgtctgaatgatatggtc
acagatgctttatcacatgtagaagactgtttgacttacatgtctgctctacgagatcct
tctatctttaggttctgcgctattccacagatcatggcgattgggacattagccatgtgc
tacaacaacattggagtcttcaggggtgttgtaaagatgagacgtggtcttactgctaag
gttattgaccggactaggacaatggaagatgtctatggtggtttttttgatttttcttgc
atgctaaaatcaaaggttgaccacaatgacccaactgcttccaaaactttgaagaggctt
gaaataatattaaagacttgtagggactctgggaccttgaacaagaggaaatcttacatt
ttgagggctgagcctaattatactcctgctctgatcattgtcttctttatcattctggct
attcttcttggatatctttctgggaacaaacctcattctgtgtga
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