Ipomoea nil (Japanese morning glory): 109165155
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Entry
109165155 CDS
T04663
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00100
Steroid biosynthesis
ini00909
Sesquiterpenoid and triterpenoid biosynthesis
ini01100
Metabolic pathways
ini01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109165155
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109165155
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ini01006
]
109165155
Enzymes [BR:
ini01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109165155
Prenyltransferases [BR:
ini01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109165155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
109165155
NCBI-ProteinID:
XP_019169349
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All DBs
Position
Un
AA seq
419 aa
AA seq
DB search
MERVWAMLKHPEDVYLLIKLTMATRRVKKQIPAAAQPHWRFCYTILSKVSRSFTLAILLL
PNDLREAVCVFYLILRALDTVEDDTSIATEVKVPVLMDFHRHIYDSKWNFSCGTNAYKVL
MDQFHYVSTAFLELGKNYQEAIEDIAMRMGRGMAKFIRKEVETIDDYDEYCHYVAGLVGL
GLSKLFHISCKEDLASDSLSNSVGLFLQKTNIIRDYLGDINEIPKCRMFWPRQIWSKYVN
DKLEELKYEENSVKAVQCLNEMVTNALSHVEDCLTYMCAFRHNPSILMFCAIPQVMSMGT
LVMCYNNIGVFRGVVQIRHGLAAKIIDRTRTMEDVYGIFYDFSCMLKSKVDIDDPNASKT
LERLEIIMKTCRESGALNNRKSYIVRSEPNYTSALMVVFFIIILAIFLGYPSKNSPHYI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagagagtgtgggcgatgttgaagcatccggaggatgtgtaccttctgataaagctg
acaatggcaacgaggcgggtgaagaagcagatcccggcggcggcgcagccgcactggaga
ttctgctacaccattctcagtaaggtctctagaagcttcacgctcgctatcctgctgctc
cctaatgaccttcgtgaagccgtttgcgttttctatttgattcttcgagcacttgacact
gtcgaggatgatacgagcatagccacagaggttaaagtgcctgttctcatggattttcat
cgtcacatatatgacagcaaatggaatttctcatgtggtacaaatgcttataaagttctc
atggaccaatttcattatgtttccactgcttttctagaactcgggaaaaattatcaggaa
gcaattgaggatattgccatgaggatgggtagagggatggcaaagtttatacgcaaggag
gttgaaacaattgatgattacgatgaatattgtcattatgttgctgggcttgtcggacta
ggcttgtcaaagctttttcatatctcgtgtaaagaagatttggcttcagattctctctcc
aattctgtgggtctgttccttcagaaaacaaacatcattagagattatctgggggatatt
aatgagatacccaagtgtcgaatgttttggccccgccagatttggagtaaatacgtcaac
gacaaacttgaggagttgaaatatgaggagaactcagtgaaggcagtacaatgtctgaat
gaaatggttacaaatgctttatcacatgtggaagattgtttgacttacatgtgtgctttc
cgacataatccttctatccttatgttttgcgctattccacaggtaatgtccatggggaca
ttagtcatgtgctacaacaacattggagtcttcaggggtgttgtgcagataaggcatggt
cttgctgctaagataattgaccgtactaggacaatggaagatgtctatggcattttttat
gatttttcttgtatgttaaagtcaaaggttgacatcgatgatccaaatgcttccaagact
ttggagaggcttgaaataattatgaagacttgtagggagtctggagccctaaacaacagg
aaatcttacattgtgaggtcggagcctaattatacttctgctttgatggttgtcttcttt
atcattattctggctatttttcttggatatccttctaagaactcacctcattatatatga
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