Ipomoea nil (Japanese morning glory): 109165299
Help
Entry
109165299 CDS
T04663
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
ini03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109165299
03083 Polycomb repressive complex
109165299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ini03036
]
109165299
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109165299
Histone modification proteins
HAT complexes
HATB complex
109165299
HDAC complexes
Sin3A-HDAC complex
109165299
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109165299
PRC2.2
109165299
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109165299
Heterochromatin formation proteins
Other heterochromatin formation proteins
109165299
Chromatin remodeling factors
NuRD complex
109165299
NuRF complex
109165299
NuRF complex (fruit fly)
109165299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
CAF1C_H4-bd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Ge1_WD40
DUF3438
Motif
Other DBs
NCBI-GeneID:
109165299
NCBI-ProteinID:
XP_019169537
LinkDB
All DBs
Position
Un
AA seq
380 aa
AA seq
DB search
MSSSSRPTTSQSRTLDDRFVRHNLDSPTPSVEWLPGGDEPEGKPYTVQKLIVGTCTPENE
QSSLMLVQVKISREDWDGKESSSSVEIGKTKRVQKINHDGVVNRARYMPQNPSIIATKTG
SAELFIFDCTKHLSNPPEEGVCNPDLRLTGHKDKGLGLSWSPFKKGHLLSGSEDGQVCLW
DVNATPHDNTLEAMRIFDKQQGCVEDVAWHMKDENLFGSVGEDKHLHIWDIRIPPIKLNQ
SVLCHDAKVNSLAFNPICGWVLATGSSDRKVKVFDLRKTSPFLHTLECHREEVGHVRWNH
KHENFLASSSGRKILVWDVNRIGRAQTSEEAKGGPPELAFLHSAHTDSITDFSWSPTYGL
AIASASKDNSVQLWRMREVK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagttctagttcgcggccaaccacgagccaatcacgcacactggacgataggttcgtc
cgtcacaacctcgacagcccgacgccctccgtcgaatggctccccggcggggacgagccg
gaggggaagccttatactgtccagaaactgatcgtcggaacttgcacgccagagaatgaa
caaagcagccttatgctcgttcaggttaagattagtcgcgaagattgggatggtaaagaa
tccagttcctctgttgagatcgggaagacaaaaagagtgcagaaaataaatcatgatggg
gtagttaaccgggctcgttacatgccacaaaacccgagtattattgctaccaagacaggt
agtgctgagcttttcatttttgattgtaccaaacatctgtcaaaccctcccgaggagggt
gtttgcaaccctgatttgaggttaaccggtcacaaagacaaaggacttggcttgtcctgg
agtccatttaagaagggtcatttgttaagtggctcagaggatggtcaagtttgcttgtgg
gatgttaatgccactccacatgataatacacttgaggctatgcgtatatttgataaacag
caaggatgtgttgaggatgtagcttggcatatgaaggatgagaacttatttggttcagtt
ggagaagataaacatctacatatatgggatatacgcattccaccaatcaagcttaatcaa
tctgtactttgtcatgatgctaaagttaactccctagcatttaatcctatttgtggatgg
gttttagcaactggatcttctgataggaaagtcaaagtgtttgatctgcgcaagacttcg
cctttcctccataccttggaatgtcacagggaggaggttggccatgttaggtggaatcac
aagcatgagaattttttagcttcaagttctggaaggaagattcttgtttgggatgttaac
aggattgggcgggcacaaaccagtgaggaggctaaaggaggacccccggagttggccttt
cttcactctgcccacacggatagcattacagacttctcatggagcccaacctacggcttg
gctatcgctagtgcatccaaggacaacagtgtacagttatggcggatgcgagaagtcaag
taa
DBGET
integrated database retrieval system
