Ipomoea nil (Japanese morning glory): 109165639
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Entry
109165639 CDS
T04663
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109165639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109165639
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109165639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
109165639
NCBI-ProteinID:
XP_019170031
LinkDB
All DBs
Position
Un
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADILDEGNVDAEHMEEDVDGELADIETLNYDDLDSVSKLQR
TQRYINIMQKVEEALEKGSENSETGMVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTNGKP
LPEDILQKTIEACDRAFALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SSLAKMPACNVQVLGAKKKTLAGFSTATSQFRIGFIEQTEIFQSTPPPLRMRACRLLAAK
ATLAARVDSTRGDPTGKTGRSLLEEVRKKIEKWQEPPPAKQPRPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAYVNQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcttagcagatctggatgaattatctgacaatgaagct
gatattcttgatgagggcaatgtggatgctgagcacatggaggaagatgttgatggtgag
ctagctgatatagaaacacttaactatgatgatctggatagtgtctctaaattgcagagg
acccagcgttatatcaatattatgcagaaagtagaagaagcactagaaaagggttctgaa
aactcagaaacagggatggttctagaagatgatccggagtaccagctgattgtagattgt
aatgcattgtcggttgatattgagaatgaaattattataattcataatttcatacgtgat
aagtaccgcctaaaattcccagagttggagtctcttgttcaccacccaattgactatgcc
cgagtggttaagaaaattgggaatgagatggacctcacccttgttgatctggaaggactg
ttgccttcagctattattatggttgtttcagttacagcatcaactacaaatggcaagccg
ctgcctgaagatatcttgcaaaagacaattgaagcttgtgatcgtgcatttgctcttgat
tcggcgaagaagaaagtccttgattttgttgagagtcgaatggggtatattgctccaaac
ctctctgctattgtaggaagtgctgttgctgcaaaacttatggggactgctggtggtctt
tcctcattggcgaagatgcctgcttgtaatgtgcaggttcttggtgctaaaaagaagacc
cttgctgggttctccacagcgacatcccaatttcgcattggatttattgagcagacagaa
atatttcagagcacaccccctcctctaaggatgcgtgcctgtcgactgttagctgcgaaa
gctacccttgctgcacgtgttgattcaacaaggggagacccaacggggaaaactgggcga
tctctcctagaagaggttcgtaagaagatagagaagtggcaagagccacctcctgccaaa
cagcctagaccacttcctgttccagattctgagcctaaaaaaaagaggggtggacgtaga
ctgaggaagatgaaagaaaggtatgccattacagacatgcggaagctggctaacagaatg
cagtttggaatacctgaagagagctcattgggggatggtttgggtgagggatatggaatg
cttggtcaggctggaagtggcaaattacgcgtgtcagttggccagagcaagcttgctgcc
aaagtagctaagaaatttaaggagaagaattatggaagcagtggtgctacatcgggactg
acttcaagtttagccttcactcctgtgcaggggattgaactgtcgaacccacaagcatat
gtaaatcaacttgggtcaggaacccagagcacgtacttctcagaaaccggaacattttcc
aagatcaagagaacataa
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