Ipomoea nil (Japanese morning glory): 109165724
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Entry
109165724 CDS
T04663
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
ini03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109165724
03083 Polycomb repressive complex
109165724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ini03036
]
109165724
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109165724
Histone modification proteins
HAT complexes
HATB complex
109165724
HDAC complexes
Sin3A-HDAC complex
109165724
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109165724
PRC2.2
109165724
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109165724
Heterochromatin formation proteins
Other heterochromatin formation proteins
109165724
Chromatin remodeling factors
NuRD complex
109165724
NuRF complex
109165724
NuRF complex (fruit fly)
109165724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_HPS5
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
DUF6922
Motif
Other DBs
NCBI-GeneID:
109165724
NCBI-ProteinID:
XP_019170165
LinkDB
All DBs
Position
Un
AA seq
405 aa
AA seq
DB search
MVEREMEATAGGEGVDEEFAVWKKNTPLLYDLVISHSLEWPSLTVQCLPSPPSHDGPFSV
HKLLLGTHTSDDCPNFLMLAQAYLPRNPASGLEHNLSEFQTPKVEIVQKILCDGEVNRAR
CMPQNTGVVAAKTNGCEVYVFDSANQHLNHDEGGSCDPYLRLRGHDKEGYGLSWSPFREG
SLLSGSNDCKICLWNISATPNDKVLEADHIYKEHEDVVEDVSWHLKNENLFGSVGDDCRL
IIWDLRTNKPQHSVIVHEKEVNYLSFNPYNEWVLATASSDTTVGLFDMRKLSSPLHVLSS
HTDEVFQVEWDPNHETVLASSAGDRRLMVWDLNRIGDEQMEGEAEDGPSELLFSHGGHKA
KISDFSWNKNEPWVISSVAEDNSLQIWQMAESIYRDDEELQTDGS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtagagagagaaatggaggcgaccgccggaggcgaaggagtggatgaggagttcgcg
gtgtggaagaagaacacgccgttgttgtacgacctcgtcatctctcattccctcgagtgg
ccttctctcaccgttcagtgccttccttctcctccatctcatgacggtcctttctctgta
cacaagctccttctgggaacccatacctctgacgactgtcccaacttccttatgctcgct
caggcctaccttcctcggaaccctgcctctggcctagagcacaatctcagtgaatttcaa
acccccaaggttgagatagtacaaaagatactctgtgatggggaagtgaatagggcaaga
tgtatgccgcagaacacaggtgttgttgcagctaaaactaatggctgtgaagtttacgtg
tttgacagtgccaaccagcatttgaatcatgatgaagggggatcttgtgacccttactta
agactgagaggtcatgataaagaagggtatggcttgtcatggagcccattcagagagggg
agtcttttgagtggctcaaatgattgcaaaatttgcttatggaatatatctgctacacct
aatgataaagtgcttgaagcagatcatatctataaggagcatgaagatgtagttgaggat
gtctcatggcatttaaagaatgaaaatctatttggatctgttggagatgattgccggcta
atcatttgggacttgcgcacaaataagcctcagcactctgttatagttcatgaaaaagag
gtgaattatttatcattcaatccatataatgagtgggttcttgccacggcatcttcagac
actacagttggtctgtttgacatgcgaaaattgagctctccattgcatgtcttaagtagt
catacggatgaagttttccaggtagaatgggatccaaaccatgaaacagtgttagcatct
tctgctggcgacagaaggttgatggtttgggaccttaataggattggagatgagcaaatg
gagggagaagctgaagatggtccttctgagcttctgttctctcatggaggtcacaaggct
aagatatctgacttctcgtggaacaagaatgagccatgggtcatatcaagtgtagcagag
gacaattctcttcagatctggcaaatggctgagagcatatatcgtgatgatgaagaattg
cagacggatggatcttga
DBGET
integrated database retrieval system
