Ipomoea nil (Japanese morning glory): 109165815
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Entry
109165815 CDS
T04663
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109165815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109165815
04121 Ubiquitin system [BR:
ini04121
]
109165815
03036 Chromosome and associated proteins [BR:
ini03036
]
109165815
03400 DNA repair and recombination proteins [BR:
ini03400
]
109165815
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109165815
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
109165815
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109165815
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109165815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
RTT107_BRCT_5
zf-RING_2
zf-C3HC4
zf-RING_10
zf-RING_UBOX
zf-C3HC4_3
zf-RING_6
zf-HC5HC2H_2
zf-C3HC4_4
zf-RING_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
109165815
NCBI-ProteinID:
XP_019170302
LinkDB
All DBs
Position
Un
AA seq
987 aa
AA seq
DB search
MADAAHLERMGRELKCPICLSLLNSAASLTCNHVFCNGCIHASMKLAPNCPVCKVPYRPR
EIRPAPQMDNLVSIYKSLEAASGVNIFVTQTETSTKIAGEENKSANKTFGVEENDSIAMQ
TSEQNNKKGNEKRGPKRSRKTKNGNCNPSSVRPSFPTKKRVQVPQQSPLESPPPTKLVAK
NAQVTASEPQKDPVINKGKMVLNEKGELNLSPFFWLREDVEKSTQLSDDKMSTQLLDEDH
ATDTPPVVPCFSDMKDSDDEFPLEMTPKSAAPGDIPKDAEFFDSEMFEWTQRPCSPELLS
SPLKLQVEDTYECEGVEQDTEATLMDLSILAEPKSGNRKIMNDENGMSKEEVSPPTLSSL
RNEISKINGGLRKSSKRVRMIESKKKNGRTRAIQELIGVHSGSEKIAKLSTKDFSNDNAL
NMGKKSHDKKKEVGIGADSAQVSLDHKEDSGGCDLKRNGKRRKVTVTQQQKVCNMSKSRK
NAPKDRIIPIGDVAVNPYPLNTDSSSKVRSKVTRAGKSKHMKQVTFSEEIFEDNIADGIQ
KFNEKNSSKETLTPENISNSLCMDTNSLSKIKKSLSNSSRSVLQKCETHPTKIQCAFCHT
AEESEGSGVMMHYLNGKPIKEDQIGSTGVIHVHKNCAEWAPNVYFNEDDDVINLETELKR
SRSISCGFCGVKGAALGCYEKTCRKSFHVPCAKMTPKCQWDHYNFVMLCPLHACCELPCK
EPEFQSKKKKKCELRNSCINQPQIAVKSDNRQDALWKSQRKNKSLVLCCSAITDAERALV
SDFERLSGATVLKTWDPSVTHIIASTNEKGACKRTFKFLMGILEGKWILTIEWIKACLNA
TELLDEQQYEIEVDTHGVRDGPRLGRLRMSNKQPKLFNGYKFYFMSDFLPSYKKYLHDLG
VAAGGTVLNRKPVSEDEKSHSSGYSSLSTFIVYSLELPDNCKTREKSSILDSRRSAAEAL
ASSTGSLAASNSWVLNCIAGCKLQDLE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgctgcacatctagaaaggatgggaagagagctcaagtgccccatctgcttg
agtctcttgaattcagctgcttcactcacgtgcaatcatgtattctgcaatggctgtata
cacgcatcaatgaagttggcgcccaattgtccagtttgtaaagttccttaccggcccaga
gaaatccgccctgctccccaaatggataacttggtcagcatttataagagcttggaagct
gcttcaggagtcaacatatttgttactcaaactgaaacttcaactaaaatagcaggtgaa
gaaaacaaatctgcaaacaagacctttggagttgaagagaatgacagtattgccatgcag
acttcagaacaaaataataagaagggaaatgaaaaaagagggcctaaaagatcaaggaag
actaaaaatggaaattgtaatccatcttctgttaggccttcctttcctacaaagaaaagg
gtccaagtgccgcagcaatcaccattagaaagcccaccgcctacaaaattggttgctaaa
aatgctcaagtaactgccagtgaacctcagaaagatcctgtcataaacaagggcaagatg
gttttaaatgagaagggagagctaaaccttagtccctttttctggctgagagaagatgtt
gaaaagtcaactcagctatcagatgacaaaatgtcaactcagctattggatgaggatcat
gccacagatacccctccagttgttccttgttttagtgatatgaaagattctgatgacgaa
tttcctcttgagatgaccccaaaaagtgctgcccctggtgacattccaaaggatgcagaa
ttttttgatagtgagatgtttgaatggacacaaaggccttgctcccctgaactcctttca
agcccattgaaactgcaggttgaagatacttacgaatgtgaaggggttgaacaggataca
gaggctaccttaatggatttaagtatacttgctgaacccaaaagtggcaacagaaaaatc
atgaatgatgaaaatggaatgagcaaggaagaggtgagtccacctactttatcttctcta
aggaatgagatctctaaaattaatggtggccttagaaagtctagcaaaagagtgcggatg
attgagagcaaaaagaaaaatggccgtacgagagcaattcaagaactaattggagtccat
agtggatcagaaaagatagccaaactgagtaccaaagatttttccaatgataatgcattg
aatatggggaagaaaagtcatgacaagaagaaagaggttggtattggtgctgattctgca
caagtttcattggatcataaagaagacagtggagggtgtgacttaaagagaaatggcaaa
agaagaaaggtaactgtcacccagcaacaaaaagtttgtaacatgtcaaaaagtagaaag
aatgctcctaaggacagaatcattccaataggagatgtggctgtgaatccctatccactt
aatacagattctagttcaaaagtaaggagtaaagttacacgtgctgggaagtcaaagcac
atgaaacaggtgacattttctgaagaaatttttgaggataatattgcagatggcatccag
aagtttaatgagaagaactccagtaaggaaactctgactccagaaaatatttcaaacagc
ttgtgtatggacacaaatagtttgtcaaaaataaaaaagtcactttccaattcgagtcgt
tcagttttgcaaaagtgtgagactcacccgacaaaaatccaatgtgcattttgccatact
gcagaagagtcggagggttcaggagttatgatgcactatcttaatgggaagccaattaaa
gaagaccagattggatcaacaggtgtcatacatgtgcataaaaattgtgcagagtgggcc
ccaaatgtatattttaatgaagatgatgatgtcattaatcttgaaactgaactgaagaga
agtaggtctatttcttgtggcttctgtggagttaaaggggcagctctaggctgctatgag
aagacttgtcgcaagagttttcatgttccctgtgcaaagatgacaccaaaatgtcaatgg
gaccattataatttcgtaatgttatgccctctacatgcttgttgtgaactgccatgcaag
gaacctgaattccaatcaaagaagaaaaagaaatgtgaactgagaaattcttgtatcaat
caaccccaaattgctgtcaaatctgataatagacaagatgcactttggaagtctcaaaga
aaaaataaaagtttggttctttgttgttcagctatcactgatgccgagagggctttggtt
tccgactttgagaggttgtcaggtgcaacagtattaaagacttgggacccaagtgtaacc
catatcattgcatctacaaatgagaagggggcatgtaaaagaacattcaaatttttgatg
ggtatcttggagggcaaatggatcctcacaattgaatggatcaaagcttgcttgaatgct
acagaacttcttgatgaacagcaatatgaaattgaagttgatactcatggagtcagagac
ggccctagacttggcagattaagaatgtcaaataagcaacctaagcttttcaatggatac
aagttctattttatgagtgacttcttaccttcatacaaaaagtatttgcacgatcttggg
gttgctgccgggggaactgtcctgaacaggaagcctgtttcagaagatgagaaaagccat
tcatctggatactcatcactgtccactttcatagtttacagccttgagctacctgataac
tgtaagactagagagaaaagttcaatcttagacagcaggcgatcagctgcagaagctttg
gctagttcaacaggttctctagctgcaagcaattcatgggttctcaactgcattgcaggc
tgcaagttgcaagatcttgaatga
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