Ipomoea nil (Japanese morning glory): 109166377
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Entry
109166377 CDS
T04663
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109166377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109166377
03036 Chromosome and associated proteins [BR:
ini03036
]
109166377
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109166377
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109166377
PBAF complex
109166377
GBAF(ncBAF) complex
109166377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
LCIB_C_CA
Flagellin_C
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
109166377
NCBI-ProteinID:
XP_019170897
LinkDB
All DBs
Position
Un
AA seq
456 aa
AA seq
DB search
MATGDTKPSSDTTSQPPAPQLESSPNQTTPVPSRSITTASTPATITSRLPETDVINVPSY
SRWFSWNHIHQGEVRFLPEFFDGKFPSKNPRVYKYYRNTIIRTFRENPTRKINFTEVRKT
IVGDVGSIRRVFDFLETWGLINYSSSASKTQLKWEDKDTKASLQSSDTNAGSVDVPVPRK
RLCSGCKSVCSIACFACDKYDMILCARCYVRGNYRVGLNSSDFRRVELNEEVKTDWTEKE
TLLLLEAVMHFGDDWKKVAGHVGGRSEKECVSRFIKLPFAQQLAGPPESTEVDSEQLPAK
RMRLTPLADASNPIMAQAAFISALAGNEVAEVAARAALKSLSEFGIGKFKGHLKSISASG
DKQESHAVEGAFAEAQSQLDSEEEKVESAISEVAVQIQEIEEKISEFDEIESQTEKEWQQ
LQQLQNLVFADQLNLILSKAATEKGGANLGSNIKTE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggcgacaccaaaccctcctccgacaccacatctcaaccaccggcaccccag
ctagaatcctccccaaatcaaaccacccccgtacccagccgctccatcaccaccgcctct
acccccgccaccatcacttctcgcctcccggaaactgacgtcatcaacgtacccagctat
tccaggtggttttcatggaaccacattcaccagggagaggtccggttccttccagaattc
tttgatggaaaattcccttcgaaaaaccctagggtttacaaatattataggaataccata
attcgtacgtttagagaaaaccccaccagaaaaatcaactttactgaggtccggaagacc
atagttggagacgtaggttcgattcgaagggttttcgattttctagagacctggggtttg
attaactactcttcctcagcctccaagactcagctcaaatgggaagacaaagatactaag
gcctctttgcagagtagcgacactaatgcaggttctgtggatgttccagtgcccaggaag
agattgtgcagtggctgcaagtccgtttgcagcattgcctgttttgcttgtgataagtat
gatatgattctttgtgcaagatgctatgtacggggtaattatagggtgggtctaaattct
tcagattttagaagagttgagctcaatgaagaggtgaagacagattggactgagaaagag
accttgctcctcctagaagctgtcatgcatttcggtgatgactggaagaaggtagcaggg
catgttggtggtagaagtgagaaagagtgtgtgtctcgctttataaagcttccttttgcc
cagcagcttgctggacctccggagtctactgaagtggatagtgaacaacttcctgccaaa
aggatgcgactaacacctcttgctgatgcaagcaaccctatcatggcacaggctgctttc
atttctgctttagcaggaaatgaggttgcagaagtagcagctcgtgctgctctaaaatct
ttatctgaattcggtattggaaaatttaaaggacatctcaaatctatttctgctagtgga
gacaagcaggaatctcatgcagttgaaggggcttttgctgaagcacaatcacaacttgat
agtgaagaagagaaggtagagagtgcaatctctgaagttgctgttcagatacaagagatt
gaagaaaagattagtgagtttgatgagatcgaatcacaaacagaaaaggagtggcaacaa
ctgcagcaactgcagaatctggtgtttgcagatcagcttaacctgatactgagtaaagct
gctacagaaaaaggcggagcaaatttgggaagcaatatcaagacggaataa
DBGET
integrated database retrieval system