Ipomoea nil (Japanese morning glory): 109166842
Help
Entry
109166842 CDS
T04663
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109166842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109166842
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109166842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
109166842
NCBI-ProteinID:
XP_019171265
LinkDB
All DBs
Position
Un
AA seq
594 aa
AA seq
DB search
MFIKEPKRQRTYAGQRVRGSGNADENLTDEAIHSYQELPVIEICVHPRHRALMKPHQVEG
FNFLARNLVTENPGGCIMAHAPGSGKTFMIISFLQSFMARYPEARPLVVLPRGILQTWKK
EFQNWQIEEDLPLYDFYSVRADNRSQQMSVLRQWAEKRSIMFLGYKQFSSIICDICRNKA
SAACQEILLKCPSVLVLDEGHTSRNQDTDIMIALEKVQTPRKVVLSGTLYQNHVNEVFNI
LNLVRPQFLKLESSRTIMRRILSTASIRRSNNKQQNSDSFFFDIVEKTLLNDTDLKRKCS
LICDLREMTKNVLHYYKGDSLDDLPGLMDFTVFLKLHPKQKRSIDKLKMEGSKFKISSEG
SAICVHHGLKDLCRFSEAKERVDEQRIDTTLAGFDIREGVKAKFFLNLLNLCEAMGEKLL
VFSQYLLPMKFLERLTINTKGYRTGNEIFSITGDSDSATRESSMEQFNTSPQARVFFGSI
KACGEGISLVGASRVIILDVHLNPSITRQAIGRAFRPRQAKIVYAYRLVGSGSPEEEDHS
TCFKKESISKMWFEWNEYNGDPDFNMQPVDPQNCGDMVLEAQRLNEDIVALYRR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaaggaaccaaagagacagagaacctatgctgggcagagagtaaggggttca
gggaatgctgatgaaaaccttactgatgaggccatccactcatatcaggagcttcctgtg
attgaaatttgtgttcatccaaggcacagagcactcatgaaaccccaccaagttgagggc
ttcaattttcttgccagaaatttggtgacagagaatccggggggttgtataatggcccat
gctcctggttcgggcaagacgtttatgatcataagttttctgcagagtttcatggccaga
taccctgaagcaaggcctttggtggtgctgccaagagggatactgcaaacctggaagaaa
gaattccagaattggcagattgaggaggatcttcctctgtatgatttttactctgtcaga
gcagataacagatcacaacagatgagtgttttaaggcaatgggcagagaagaggagcatt
atgttcctgggatacaagcagttctcatcgatcatatgcgatatctgcagaaacaaggct
tcagctgcttgtcaagagattctgctgaaatgcccatcagttctggttctggatgagggc
catacttccaggaaccaagatacagacatcatgattgcactcgaaaaggtccagacgcct
cgaaaggtcgtgctttctggaaccttgtaccaaaatcatgtcaacgaggtgttcaacatc
ctcaacctcgttcgcccgcagttcctgaagctcgagagctcaagaaccatcatgagaaga
atactgagcacagcttcaataagaaggagcaataataagcagcaaaattcagacagcttt
ttcttcgatatcgtggagaagacgctcttaaacgacactgatctcaagaggaaatgttcc
ctcatatgtgatctgagggaaatgaccaaaaatgttcttcattactacaaaggggactcc
ctggatgatcttcctgggctgatggatttcacagtctttcttaaacttcatcccaaacag
aaaaggtcaattgataaactgaaaatggagggttcaaagttcaagataagctctgaagga
agtgccatttgtgtccaccatggcttaaaagatctctgcagattctctgaagctaaggaa
agagttgatgagcaaaggattgataccaccctggctggtttcgacataagagaaggagta
aaggccaaatttttcctaaaccttctgaatctctgtgaagccatgggtgaaaaactatta
gtgtttagccagtacttacttcccatgaagttcctggaaaggctaaccatcaacaccaag
ggctatagaactggcaacgaaatcttctcgatcaccggggactcagactcagcaacacga
gagtcttctatggagcaattcaacacttccccgcaagctcgagtcttctttggctcaatc
aaagcttgcggggaaggcatatcgctcgttggtgcttctcgggtcatcatattggatgtt
cacctgaacccatcgatcactcgccaggctatcgggcgagcattcaggcccaggcaggcg
aagatagtgtatgcttacagattggtgggttctggatcccctgaggaggaagaccactcc
acatgctttaagaaggaatcaatctcaaagatgtggtttgagtggaatgagtataatggg
gatccagatttcaatatgcagcctgtggatccacagaattgtggagatatggttcttgag
gcacaacgcttaaatgaagacattgttgctctctacagaagataa
DBGET
integrated database retrieval system
