Ipomoea nil (Japanese morning glory): 109167120
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Entry
109167120 CDS
T04663
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
ini03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109167120
03083 Polycomb repressive complex
109167120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ini03036
]
109167120
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109167120
Histone modification proteins
HAT complexes
HATB complex
109167120
HDAC complexes
Sin3A-HDAC complex
109167120
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109167120
PRC2.2
109167120
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109167120
Heterochromatin formation proteins
Other heterochromatin formation proteins
109167120
Chromatin remodeling factors
NuRD complex
109167120
NuRF complex
109167120
NuRF complex (fruit fly)
109167120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_HPS5
Beta-prop_TEP1_C
NBCH_WD40
MIOS_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
109167120
NCBI-ProteinID:
XP_019171595
LinkDB
All DBs
Position
Un
AA seq
424 aa
AA seq
DB search
MGKDDDEMRGELEERQINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKVILGTHTSENEPNYLMLAKVQLPLEDAENDARHYDDDRSDFGGFGCANGKVQIIQ
QINHEGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINATPKNKALDAMHIYKIHEGVVEDVAWHLRHE
YLFGSVGDDQYLHVWDMRTPSVTKPMQSVVAHNGEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKITSALHTFECHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDDDDITGDDA
TKAP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgatgacgagatgaggggtgagttagaggagaggcaaattaacgaggag
tacaagatttggaagaagaatactccgtttctctatgatctggttatcactcacgcgctt
gagtggccgtcgcttaccgtcgaatggcttcccgaccgggaagagccacctgggaaggat
tactcagtccagaaggttattctagggacccacacttccgagaacgagccgaattacctc
atgctcgccaaagtccagctcccgctcgaggatgctgaaaatgatgctcgccattatgac
gacgatcggtcggacttcggcggtttcggttgtgccaatggaaaggtacaaataatccag
caaataaatcatgaaggagaagttaatagggctcgttatatgcctcaaaactcatttatt
attgccaccaagacagttagtgctgaagtttatgtttttgattatagcaagcatccatct
aagcctcctttggatggtgcatgcaatcctgatttgaggctaagaggtcacagcactgaa
ggatatggtttgtcatggagtcagtttaagcagggccatttgctaagtggctcagatgat
gctcagatttgcctgtgggacattaatgctactccaaagaataaggcccttgatgccatg
catatatataagattcacgagggagttgttgaggatgtagcatggcatctgaggcatgag
tatttgtttggttcagttggagatgatcaatatctacacgtatgggatatgcggactcca
tcagtcaccaagcctatgcagtctgtagttgctcataatggagaggtcaactgcttagca
ttcaatccttttaatgagtgggttgtcgcaacgggatccactgacaagacagtcaaatta
tttgatctgcgcaagattacttctgccctccatacctttgaatgtcacaaggaggaggtt
ttccaagttggttggaatccaaagaatgagactatcttagcttcttgttgccttggtagg
agactcatggtctgggacctgagcaggattgatgaagagcaaacaccagaggatgctgaa
gatgggccgccagaattgctctttattcatggtgggcataccagtaaaatttccgacttc
tcatggaatccatgtgaagattgggtcattgccagtgtagccgaagataacatactacaa
atctggcaaatggccgagaacatttatcatgatgatgatgatataactggagatgacgct
acaaaagctccctag
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