Ipomoea nil (Japanese morning glory): 109167293
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Entry
109167293 CDS
T04663
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109167293
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109167293
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109167293
NCBI-ProteinID:
XP_019171857
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All DBs
Position
Un
AA seq
379 aa
AA seq
DB search
MAAAVIIIMPLLGIMGFVPTLNAAADKATSMNVIDSCWRAKSNWASNRRALADCGVGFGK
DAVGGKYGNTYVVTDPSDNPGNPKPGTLRYGAIQSAPLWIMFAKDMVITLKNELMVNSHK
TIDGRGATVEIANGPCITIQGVTNIIIHGISMHDCKPGKSGTVRDTPTHAGRRRGSDGDA
ISIFSASNIWIDHCYLARAADGLIDVIHGSTAITISNNYFTQHDKVMLFGHNDNNVEDKA
MKVTVAFNHFGPGLIERMPRVRLGYAHVANNRYTGWLMYAIGGSANPTIFSEGNYFMAPN
KSESKQVTKREVKKGWSNWKWRSSKDKFLNGAYFVPSGYGSCAPYYTKSQSFPVADGSRV
PALTADAGPLRCSYSSSKC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgtaatcatcatcatgccgcttctcggcattatgggtttcgtcccaacc
ttaaacgccgccgccgacaaggcaacctccatgaacgtcatagactcctgctggcgcgcc
aagtcgaactgggcgtccaaccgccgcgcattggccgactgcggcgtcgggttcgggaaa
gacgccgtcggcgggaagtatggcaacacgtacgtggtgaccgatccgtcggacaacccc
gggaaccccaagcccggcacgcttaggtacggcgctattcaatcggcgccgctgtggatt
atgtttgctaaggatatggttattacgctgaagaatgagcttatggtgaatagccataag
accattgacgggagaggggcgacggtggagatcgctaatgggccttgcatcaccatccaa
ggcgtcaccaatataatcatacatggaattagcatgcacgattgtaagcccgggaagtcc
ggcaccgtgagggatactcccacgcatgccggccgccgtcgcggctccgacggcgacgcc
atttccatctttagtgcctctaacatttggattgatcattgctaccttgcacgtgccgcc
gatggcctcattgacgtcattcatggctccacggccatcaccatttctaacaactatttc
actcaacacgacaaagttatgttgtttgggcataatgataacaacgtagaagacaaagct
atgaaagtgacagtggcgttcaatcattttggccccggtttaattgaaagaatgcctagg
gtgagactaggttatgctcatgttgctaacaatagatacactggatggttgatgtatgca
attggtgggagtgcaaaccctaccatttttagtgaagggaattactttatggcacctaat
aaatccgaatcgaagcaagttacaaagagggaggtaaagaaagggtggtcgaactggaaa
tggaggtcgtccaaggataaatttctaaatggggcatacttcgtaccttccggatatgga
agctgcgcgccgtactacacgaaatctcagtcgtttccggtggccgacgggtcgagggtt
ccggcgctcacggcggacgcagggccgctgagatgctcttactcctcctccaaatgttga
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